| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0014 |
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| Symbol | |
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| ID | 4692781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 21430 |
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| End bp | 24165 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639847800 |
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| Product | methionine synthase |
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| Protein accession | YP_994825 |
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| Protein GI | 121607018 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0698387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCCA TTTCGCTGCC CCCGATGAAG CTGTCCGGCC TGGAGCCGGT GTCCATTGGC
CCGGACTCGC TGTTCGTCAA CATCGGCGAG CGCACCAACG TCACCGGCTC CAAGGCGTTT
GCGCGCATGA TCCTGAACGG CCAGTACGAG CAGGCCCTGG CCGTGGCGCG CCAGCAGGTG
GACAACGGCG CCCAGATCAT CGACATCAAC ATGGACGAGG CCATGCTCGA CAGCAAGGCC
GCGATGGTGC GCTTTCTGCA ACTGATCGCG TCCGAGCCGG ACATCGCCCG CGTGCCGATC
ATGATCGACA GCTCCAAGTG GGAGGTGATC GAAGCCGGCC TGCGCTGCAT ACAGGGCAAG
GGCATCGTCA ACTCCATCAG CATGAAAGAG GGCCTGGCGC AGTTCAAGCG CCAGGCGGGA
CTGGTGCGCC GCTATGGCGC CGCCGCCGTG GTGATGGCCT TCGACGAGCA GGGCCAGGCC
GACACCTGCG GGCGCAAGAT CGCGATCTGC GAGCGCGCCT ACCGCATCCT GGTGGACGAG
ATCGACTTCC CGCCCGAGGA CATCATCTTC GACCCCAACA TCTTCGCCGT GGCCACCGGC
ATCGAGGAGC ACGACAACTA CGCGGTCGAC TTCATCGAGG CCACCCGCTG GATCAAGCAG
AACCTGCCCG GCGCCAAGGT GTCGGGCGGT GTGTCCAACG TCTCGTTCAG CTTCCGTGGC
AACGACCCGG TGCGCGAGGC CATCCACACC GTGTTCCTGT ACCACGCCAT CGCGGCCGGC
ATGGACATGG GCATCGTCAA CGCCGGCATG GTGGGTGTGT ACGACGACCT CGAGCCTGCG
CTGCGCGAGC GCGTGGAGGA CGTGATCCTG AACCGCCGGG CCGATGCTGG CGAGCGCCTG
GTCGAAATCG CCGAAAGCGC CAGGAGCAGC GCCAGGGACG ACAGCCGCAA GCTCGAATGG
CGCGGCACGC CCGAAGCCCC CAAGACCGTC GGCGAGCGCT TGGGTCACGC GCTGGTGCAC
GGCATTACCG ACTTCATCAC CCGGGACACC GAGGAGGCTT ATCAGCAGAT TCTGGCCCGG
GGCGGTCGCC CGCTGCATGT GATCGAAGGC CCGCTGATGG ACGGCATGAA CATCGTCGGC
GACCTGTTTG GCGCGGGCAA GATGTTCCTG CCGCAGGTGG TCAAGAGCGC GCGCGTGATG
AAACTGGCCG TGGCGCACCT GATCCCCTAC ATCGAAGAAG AAAAGCGCCA GGACGAACTG
GCCGGGCGCG ACGTGCGCAG CAAGGGCAAG ATCGTCATCG CCACCGTCAA GGGCGACGTG
CATGACATCG GCAAGAACAT CGTCACCGTG GTCTTGCAGT GCAACAACTT CGATGTGGTG
AACATGGGCG TGATGGTGCC CTGCCACGAG ATTCTGGCCC GCGCCAAAGC CGAGGGGGCC
GACATCGTGG GCCTGTCCGG CCTGATCACC CCGAGCCTGG AAGAAATGCA ATACGTGGCC
GGCCAGATGC AGAAAGACGA GCATTTCCGG CTGCGCAAAA TCCCGCTGCT GATCGGCGGC
GCCACCACCA GCCGCGTGCA CACCGCCGTC AAGATCGCGC CGCACTACGA AGGCCCCGTG
GTCTACGTGC CCGACGCCTC GCGCAGCGTG GGCGTGGCGC AAAACCTGCT GGGCCAGGCG
CTGGGCAGCT ACCTGCAGGA ACTCAACGCC GACTACGACA AAGTGCGCCG CCTGCACGCC
AGCAAAAAAC CGCTGCCGCT GTGGCCCCTG GCCAAGGCTC GCGCGAACAA GACCCCCATC
GACTGGTCTG CCTGCCAACC CGCCGCGCCG CGCGCCATGG GTCGGCGCGT GTTCAAGAAC
TTCGACCTGG CCGGGTTGGA AAAGTACATC GACTGGGGCC CGTTCTTCCA GACCTGGGAC
CTGGCCGGCC CGTACCCCGC CATCCTGACC GACGCCGTGG TGGGCGCGGC AGCCAGCCGC
GTATTCGCCG ACGGCCAGGC CATGCTCAAG AAAATCATCG CCGGCCGCTG GCTCACGGCC
AGCGGCGTGG TGGCCCTGCT GCCGGCCAAC AGCGTCGGCG AGGACATCGA GTTCTACACC
GACGACACCC GCACCCGGTG CGCGATGACC TGGTACGGCC TGCGCCAGCA GACGCAAAAG
CATGTCATCG ATGGCGTCAT GCGCCCGAGC CGCTGCCTGT CGGATTTCGT CGCGCCCAAG
GACAGCGGCA TCGCCGACTA CGCCGGCCTG TTTGCCGTGA CGGCGGGCCT GGGGATCGAG
AAAAAGGAGC AGGACTTCAT CGCCGCGCTC GACGATTACA GCGCCATCCT GTTCAAAAGC
CTGGCCGACC GCCTGGCCGA AGCCTTTGCC GAATGCCTGC ACCAGCGCGT GCGCACCGAC
CTGTGGGGCT ACGCGCCCGA CGAGCGGCTC AGCCCTGCCG AATTGATCGC GGAAAAATAC
CGTGGCATCC GCCCCGCCCC CGGCTACCCC GCCTGCCCGG ACCACAGCGC CAAGGCAGCG
ATGTTTCGCG TGCTGCAATG CGCAGACATC GGCATGGGCC TGACCGGGAG CCTGGCCATG
ACGCCCGCAG CGAGCGTCAG CGGCTTCTAC CTGGCCCACC CCGACAGCCG ATACTTCAGC
GTCGGCACGA TCGGCCAAGA CCAACTGCAA GCCATGGCCG AGCGCCGGGG CATGGAGCAG
CCGGCGCTGG CGCGGCTGCT GGCGTCAAAC CTGTGA
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| Protein sequence | MSAISLPPMK LSGLEPVSIG PDSLFVNIGE RTNVTGSKAF ARMILNGQYE QALAVARQQV
DNGAQIIDIN MDEAMLDSKA AMVRFLQLIA SEPDIARVPI MIDSSKWEVI EAGLRCIQGK
GIVNSISMKE GLAQFKRQAG LVRRYGAAAV VMAFDEQGQA DTCGRKIAIC ERAYRILVDE
IDFPPEDIIF DPNIFAVATG IEEHDNYAVD FIEATRWIKQ NLPGAKVSGG VSNVSFSFRG
NDPVREAIHT VFLYHAIAAG MDMGIVNAGM VGVYDDLEPA LRERVEDVIL NRRADAGERL
VEIAESARSS ARDDSRKLEW RGTPEAPKTV GERLGHALVH GITDFITRDT EEAYQQILAR
GGRPLHVIEG PLMDGMNIVG DLFGAGKMFL PQVVKSARVM KLAVAHLIPY IEEEKRQDEL
AGRDVRSKGK IVIATVKGDV HDIGKNIVTV VLQCNNFDVV NMGVMVPCHE ILARAKAEGA
DIVGLSGLIT PSLEEMQYVA GQMQKDEHFR LRKIPLLIGG ATTSRVHTAV KIAPHYEGPV
VYVPDASRSV GVAQNLLGQA LGSYLQELNA DYDKVRRLHA SKKPLPLWPL AKARANKTPI
DWSACQPAAP RAMGRRVFKN FDLAGLEKYI DWGPFFQTWD LAGPYPAILT DAVVGAAASR
VFADGQAMLK KIIAGRWLTA SGVVALLPAN SVGEDIEFYT DDTRTRCAMT WYGLRQQTQK
HVIDGVMRPS RCLSDFVAPK DSGIADYAGL FAVTAGLGIE KKEQDFIAAL DDYSAILFKS
LADRLAEAFA ECLHQRVRTD LWGYAPDERL SPAELIAEKY RGIRPAPGYP ACPDHSAKAA
MFRVLQCADI GMGLTGSLAM TPAASVSGFY LAHPDSRYFS VGTIGQDQLQ AMAERRGMEQ
PALARLLASN L
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