Gene Veis_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0003 
Symbol 
ID4693372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3321 
End bp5927 
Gene Length2607 bp 
Protein Length868 aa 
Translation table11 
GC content66% 
IMG OID639847789 
ProductDNA gyrase, B subunit 
Protein accessionYP_994814 
Protein GI121607007 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG ACAACCCCCT GCCCGAGCCC GCACCCGGCG GCACTGGTGG GCCTGCCCTG 
CCAAAGATCG ACACCCGGCA GGCGGGCGCC AGCGAAAGCT ACGACGCAGG CGCCATCACC
ATCCTGGAAG GTCTGGAGGC GGTGCGCAAG CGCCCCGGCA TGTACATCGG CGACACCAGC
GACGGCACCG GACTGCACCA CCTGGTGTTC GAGGTGGTGG ACAACTCGAT CGACGAAGCC
CTGGCCGGCC ACTGCGACGA CATCGTGGTG ACCATCCACA CCGACAACTC GATCAGCGTG
ACCGACAACG GTCGCGGCAT TCCCACCGGC GTGAAGTTCG ACGACAAGCA CGAGCCCAGG
CGCAGCGCGG CCGAAATCGC GCTGACCGAA CTGCACGCGG GCGGCAAGTT CAACCAAAAC
AGCTACAAGG TATCGGGCGG CCTGCACGGC GTGGGCGTGA GCTGCGTGAA CGCGCTGAGC
AAATGGCTGC GCCTGACGGT GCGCCGCGAA GGCCGGGTGC ACCAGCTCGA ATTTGCGCGC
GGCTTCGTGC AAGACCGCCT GCTCGACACC GTGGACGGCG TCGCCGTCTC GCCGATGAAG
CTCGCCGGCG CGACCGAAAA ACGCGGCACC GAAGTGCACT TTCTGCCCGA CGCCGAAATC
TTCAAAGAAA ACCGCGACTT CCACTACGAA ATTCTGGCCA AGCGGCTGCG CGAGCTGTCC
TTTTTGAACA ATGGCGTGCG CATCCGCCTG AAAGACGAGC GCAGCGGCAA GGAAGACGAC
TTCTCGGGCG CCGGCGGCGT GCGCGGTTTC GTCGAATTCA TCAACAAGGG CAAGACCGCC
CTGCACCCGA ACTCGTTTTA CGCCACCGGC GAGCGCCCGG CCGAGACCTA TGGCGGCATC
CCCGGCACGC ATATCGGCGT GGAAGTGGCC ATGCAGTGGA ACAGCGCCTA CGCCGAGCAG
GTGCTGTGCT TTACCAACAA CATCCCCCAG CGCGACGGCG GCACCCACCT GACCGGCCTG
CGCGCGGCGA TGACCCGCGT CATCAACAAG TACATCGAAG AAACCGAAAT GGCCAAGAAG
GCCAAGGTCG AAGTCACCGG CGACGACATG CGCGAAGGGC TGTGCTGCGT GCTGAGCGTG
AAACTGCCCG AGCCCAAGTT CAGCAGCCAG ACCAAGGACA AACTGGTATC GAGCGAAGTG
CGCGCCCCGG TGGAAGACAT CGTGGGCAAG CTGCTGGCCG ACTACCTGCA GGAAAAGCCC
GCCGACGCGA AGATCATCTG CAGCAAGATC GTGGACGCCG CCCGCGCCCG CGAAGCCGCC
CGCAAGGCCC GTGAAATGAC GCGCCGCAAG GGCGCGCTCG ACGGCCTGGG CCTGCCCGGC
AAGCTGGCCG ACTGCCAGGA AAAAGACCCC GCGCTGTGCG AGATCTACAT CGTCGAGGGC
GACTCGGCCG GCGGCTCTGC CAAGCAGGGG CGCGACCGCA AATTCCAGGC CATCTTGCCG
CTGCGCGGCA AGATCCTGAA CGTGGAAAAA GCCCGCTACG AAAAGCTGCT GACCAGCGAC
GCCATCCTGA CGCTGATCAC CGCCCTGGGC ACCGGCATCG GCAAGGCCGG CGGCAGCGCC
GGCGGCGACG ACTTCGACGC CGCCAAGCTG CGCTACCACC GCATCATCAT CATGACCGAC
GCCGACGTCG ACGGCGCCCA TATCCGCACC CTGCTGCTGA CCTTCTTTTA CCGGCAAATG
CCCGAACTGG TCGAGCGCGG CCACATCTAC ATCGCCCAGC CGCCGCTGTA CAAGGTCAAA
GCCGGCAAAG AGGAGTTGTA CCTGAAGGAC GACCCGGCGC TGGACAACTT CCTGCTGCGC
ATTGCGCTGA ACCAGGCCAG CGTGCTCACC GGCAACGCCG ACCAGGCCGT GCTGAGCGGC
GCGACCCTGA CCGAACTGGC GCGCAAGCAC CAGAGCGCCG AAAGCGTGAT CGCCCGCCTG
AGCCACTTCA TGGACGCAGA AGCGCTGCGC GCAATGGCCG ACGGCGTGCG CCTGCGGCTG
GGCAGCCTGG CCGATGCCCA GGCCAGCGCC GTGGCGCTGC AAGCCAAGCT GCGCGAGCTG
CACACCACCG GCGCCCCGGC CGAAGTGACG GGCGAGTTCG ACGCCCGCAC CGACAAGCCC
CTGCTGCGCA TCAGCCGCCG CCACCACGGC AACATCAAGA GCAGCGCGAT CACGCAAGAC
TTCGTGCACG GCGCCGACTA TGCCGCCCTG GCCGAAGCCG CCGAAACCTT CCGCGGCCTG
CTCGGCGCAA ACGCCAAGGC CATGCGCGGC GAGGCGGAAA AGCAAAAGGA AGAAAAAATC
AGCGACTTCC GCCAGGCCAT GAAATGGCTC ATCAGCGAAG CCGAGCGCAC CACCACCCGC
CAGCGCTACA AGGGCCTGGG CGAAATGAAC CCCGAGCAGC TATGGGAAAC GACGATGGAC
CCGAGCGTGC GCCGCCTGCT GCGCGTGCAG ATCGACGACG CCATCGAGGC CGATCGCGTG
TTCACGATGC TGATGGGCGA TGAGGTCGAG CCACGGCGGG ACTTCATCGA GATGAATGCG
CTCAGGGCGG GGAACATCGA CGTTTGA
 
Protein sequence
MTADNPLPEP APGGTGGPAL PKIDTRQAGA SESYDAGAIT ILEGLEAVRK RPGMYIGDTS 
DGTGLHHLVF EVVDNSIDEA LAGHCDDIVV TIHTDNSISV TDNGRGIPTG VKFDDKHEPR
RSAAEIALTE LHAGGKFNQN SYKVSGGLHG VGVSCVNALS KWLRLTVRRE GRVHQLEFAR
GFVQDRLLDT VDGVAVSPMK LAGATEKRGT EVHFLPDAEI FKENRDFHYE ILAKRLRELS
FLNNGVRIRL KDERSGKEDD FSGAGGVRGF VEFINKGKTA LHPNSFYATG ERPAETYGGI
PGTHIGVEVA MQWNSAYAEQ VLCFTNNIPQ RDGGTHLTGL RAAMTRVINK YIEETEMAKK
AKVEVTGDDM REGLCCVLSV KLPEPKFSSQ TKDKLVSSEV RAPVEDIVGK LLADYLQEKP
ADAKIICSKI VDAARAREAA RKAREMTRRK GALDGLGLPG KLADCQEKDP ALCEIYIVEG
DSAGGSAKQG RDRKFQAILP LRGKILNVEK ARYEKLLTSD AILTLITALG TGIGKAGGSA
GGDDFDAAKL RYHRIIIMTD ADVDGAHIRT LLLTFFYRQM PELVERGHIY IAQPPLYKVK
AGKEELYLKD DPALDNFLLR IALNQASVLT GNADQAVLSG ATLTELARKH QSAESVIARL
SHFMDAEALR AMADGVRLRL GSLADAQASA VALQAKLREL HTTGAPAEVT GEFDARTDKP
LLRISRRHHG NIKSSAITQD FVHGADYAAL AEAAETFRGL LGANAKAMRG EAEKQKEEKI
SDFRQAMKWL ISEAERTTTR QRYKGLGEMN PEQLWETTMD PSVRRLLRVQ IDDAIEADRV
FTMLMGDEVE PRRDFIEMNA LRAGNIDV