Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A3525 |
Symbol | |
ID | 4678748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 3483604 |
End bp | 3484434 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639847778 |
Product | OmpW family outer membrane protein |
Protein accession | YP_994803 |
Protein GI | 121600620 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAAAG CACTCTGCAC GGCGCTCGGC GTCGCGGCGC TGACGCCGCT CGCCGCGCAC GCGCAAAGCG CGGGCAGCAA CGTCGTCACG CTCGGCTGGT TTCACGTGAT GCCGCAGCAA AGCAGCACGC CGCTTACGAC GAATGTCGCG CCGACGCCGA TCAACACGCC GCTGCGTTTG CCGCCGTCGT TCACGTCGGC GGGCACCGGG CTTTCGACGA GCGGCGCGGA CACCGTCGGC CTGACCGTCA GCCACTTTCT GACCGACCAC ATCGCGGTCA CCTCGGTGGC GGGCGTGCCG CCCGTCTTCA AGGTGTCCGG CCACGGCACG ATCACGCCGC CCGGCCCGGC CGGCGCGCTC GGCACGCAGA ACATCGGGCT CGCCCAGGTC AATCCGATCG TGAAGAGCGT GCGGCAGTGG AGCCCCGCCG TCGTATTCCA GTACTACTTC GCGCAAGCCA CCGCGAAGTT CCGGCCGTTC GTCGGCATCG GCGTGTCGTA CAACTGGTTC AGCGATCTGC AACTGAACAC GAACTTCATC AAGCAGACGC AGGACAACCT CGGCGCGATT CTCGCCGCGG GCGCGGGCAA GCCGGGGGTC ACGCAGGTAT CGGCGAAAGC GTCGTCGTCG TGGCAGCCGG TGTTCAATGC GGGCCTGTCG TACAACATCA CCGATCATTG GGGGCTCGTC GCATCGGTCA CGTACATCCC GCTGAAGACG ACGTCGACGG TGACGATCAA GGCGGCCGAC GGCACGACGC TCGCCGAGTC GAAATCGGAT CTGAAGGCCG ATCCGATCAT CAGCTACGTG GCGGTGTCGT ACAAGTTCTG A
|
Protein sequence | MRKALCTALG VAALTPLAAH AQSAGSNVVT LGWFHVMPQQ SSTPLTTNVA PTPINTPLRL PPSFTSAGTG LSTSGADTVG LTVSHFLTDH IAVTSVAGVP PVFKVSGHGT ITPPGPAGAL GTQNIGLAQV NPIVKSVRQW SPAVVFQYYF AQATAKFRPF VGIGVSYNWF SDLQLNTNFI KQTQDNLGAI LAAGAGKPGV TQVSAKASSS WQPVFNAGLS YNITDHWGLV ASVTYIPLKT TSTVTIKAAD GTTLAESKSD LKADPIISYV AVSYKF
|
| |