| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3500 |
|---|
| Symbol | |
|---|
| ID | 4679748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 3458798 |
|---|
| End bp | 3459268 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639847753 |
|---|
| Product | LrgA family protein |
|---|
| Protein accession | YP_994778 |
|---|
| Protein GI | 121600339 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGA TTTCGGCTAC GGCGGCAACC GCGACTCGCC CGACGACGGC GGCGCCCGCG
CGCGCCGGCC GCGTGGCGCG CATCGCGTTG CAGACGGCCG CGCTCGGCGC GCTGTGGGCG
GCGATCGATT GGACGGTGCG CGCGTTCGGC GTGCCGGTGC CGTCCGGCGT GGTCGGCCTC
GCGGTGCTGC TCGCGCTGCT GCTGTCCGGC CGCGTCGCGC CCGGCTGGGT GAAGGACGGC
GCGAACTGGC TGCTGTCCGA CATGCTGCTC TTCTTCATCC CGGCGACCGT CGCGGCCGTC
CAGTACGGCG GTCTCTTCAA GGCGGACGGC TGGCGGCTCG CGCTCGTCGT CGTCGCCGGA
ACCACGTTCG TGATGCTGTC GGTGGCGATC GCGGTCGACG TCGCGGCGGG CTTCGAGCGG
CGGCTCGCGG TGATGCGCGT GCGTGCCGGC CGCCGCCGCG CGCGGGCCTG A
|
|---|
| Protein sequence | MSRISATAAT ATRPTTAAPA RAGRVARIAL QTAALGALWA AIDWTVRAFG VPVPSGVVGL
AVLLALLLSG RVAPGWVKDG ANWLLSDMLL FFIPATVAAV QYGGLFKADG WRLALVVVAG
TTFVMLSVAI AVDVAAGFER RLAVMRVRAG RRRARA
|
|---|
| |