Gene BMASAVP1_A3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A3214 
Symbol 
ID4679027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp3179345 
End bp3180076 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content62% 
IMG OID639847470 
ProductOmpW family outer membrane protein 
Protein accessionYP_994497 
Protein GI121598577 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA AAATGGCCAT TACGGGGGCC GTTGCGCTCG CTTTCGCGGC AGCCGCGACG 
GGTGCGCACG CGCAATCCGC AGGCAGCTTC TATGTGACGA CCGGCTGGTT CCATCTCGCC
CCTCAGGACA GCAGCGATCC GCTGAAGATC ATGAACGTCG GCGGCTCGCC GGTGAATCAC
GAGGTGCCCA ACACGGGCGC GGGCATCGAC AATGCGGACA CCATCGGCCT CGCCGCCGGC
TACTTCCTGA CGGATCACAT CGCCACTGAA TTGGTCGCCG GGATCCCGCC AAGGTTCAAT
CTGAACGGCA AAGGCTCGCT CGAGCAATTC GGCGTGCTCG GTCATGCTTA TCAATGGAGC
CCGGCGCTCC TCCTCAAGTA TTACTTCAAC GACGCGAAGG CGAAATTCCG GCCCTACGTC
GGCATCGGCG CCTCGTATAT CTGGTTCACC GGCGCGAAGA TCACGAACAC CGCATTCGAG
CGCGGCGCGC TCGGCGGGCC GACCAGCGTG CAGACCAGCA ATCAGTGGGC GCCCGTCCTC
AACGCGGGCT TCACGTACAA CTTCACCGAT CACTGGTTCG GCGGGCTGTC GGTGTCGTAC
ATCCCCGTCA GCCTGACGGC CACGCTGACG ACGCAGCGCC CGACGCCGAT CGGCAACGTC
ACGCAGACCT CGCAAGCGAA GATCACGCTG AATCCGATCG TGACCTACCT GAACATCGGC
TACCGTTTCT AA
 
Protein sequence
MKQKMAITGA VALAFAAAAT GAHAQSAGSF YVTTGWFHLA PQDSSDPLKI MNVGGSPVNH 
EVPNTGAGID NADTIGLAAG YFLTDHIATE LVAGIPPRFN LNGKGSLEQF GVLGHAYQWS
PALLLKYYFN DAKAKFRPYV GIGASYIWFT GAKITNTAFE RGALGGPTSV QTSNQWAPVL
NAGFTYNFTD HWFGGLSVSY IPVSLTATLT TQRPTPIGNV TQTSQAKITL NPIVTYLNIG
YRF