| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3213 |
|---|
| Symbol | ugpQ |
|---|
| ID | 4681754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 3178438 |
|---|
| End bp | 3179199 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639847469 |
|---|
| Product | cytoplasmic glycerophosphodiester phosphodiesterase |
|---|
| Protein accession | YP_994496 |
|---|
| Protein GI | 121601282 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACC TGCAAACCTG GCCTTATCCG CGCGTGGTCG CGCACCGCGG CGGCGGCGCG
CTGGCTCCCG AGAACACGCT CGCCGCGCTC GACGCCGGCG CGCACTACGG GCACAAGATG
GTCGAATTCG ATGCGAAGCT GTCGGCGGAC GGCGTCGCGT TCCTGCTGCA CGACGACACG
GTCGAGCGCA CGTCGAACGG CGCGGGTGCC GCGCGCGACA TGCGCTACGC GGCGCTCGAG
GCGCTCGACG CCGGCGCGTG GTATGACGCG CGCTTCTCGG GCGAGCGGAT GCCGACGCTC
GCGCAGGCGG CGGCGCGCTG CCTCGCGCTC GGCCTCGCGG CGAACGTCGA GATCAAGCCG
TGCCCGGAGC GCGATGCGGA AACGGGCAGC GTCGTCGCGG CGCTGGCGGC CGAGCTCTGG
CGCGACGCCG CCGTGCCGCC GCTGCTGTCG TCGTTTTCGG CCGCCGCGCT CGACGCGGCG
CGCGAGGCCG CGCCGGCGCT GCCGCGCGGG ATGCTGTACG AGGAGATTCC GGCCGGCTGG
CTGGAACAGA CGCAACGGCT CGGCTGCGTG TCGCTGCACG CGCACCATGC GCAATTCAAC
GCGGCGCTCG TGCGCGACTT GAAGGCGTCG GGGTTGCGCC TTCTCGCGTA CACGGTGAAC
GACCCCGTTC GCGCGCGCGA ACTCGCCGAT TGGGGCGTGG ACCTCATTTG CACGGACCGG
ATCGACCTGA TCGGCGCGGA TTTCGCCGAT CGGGAAGGAT GA
|
|---|
| Protein sequence | MTNLQTWPYP RVVAHRGGGA LAPENTLAAL DAGAHYGHKM VEFDAKLSAD GVAFLLHDDT
VERTSNGAGA ARDMRYAALE ALDAGAWYDA RFSGERMPTL AQAAARCLAL GLAANVEIKP
CPERDAETGS VVAALAAELW RDAAVPPLLS SFSAAALDAA REAAPALPRG MLYEEIPAGW
LEQTQRLGCV SLHAHHAQFN AALVRDLKAS GLRLLAYTVN DPVRARELAD WGVDLICTDR
IDLIGADFAD REG
|
|---|
| |