Gene BMASAVP1_A3154 details

Gene Information

• Locus tag: BMASAVP1_A3154
• Symbol: rplF
• ID: 4678963
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: -
• Start bp: 3126458
• End bp: 3126988
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 639847410
• Product: 50S ribosomal protein L6
• Protein accession: YP_994441
• Protein GI: 121601552
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.0206863
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGAG TAGGTAAGAG CCCGATCGCG CTGCAAGGCG CGGAAGTCAA GCTGGCCGAC 
GGTGCGATCA CCGTCAAGGG CCCGCTGGGC ACCATCACGC AGGCGGTCAA TCCGCTCGTG 
AACGTGGCGA ACAACGACGG CACGCTGAAC CTGTCGCCGG TCGACGACAG CCGCGAAGCA 
AATGCACTGT CGGGCACGAT GCGCGCGATC ATCGCGAATG CCGTGCACGG CGTGACCAAG 
GGTTTCGAGC GCAAGCTGAC GCTGGTGGGC GTCGGCTATC GTGCGCAGGC GCAAGGCGAC 
AAGCTGAACC TGTCGCTGGG TTTCTCGCAC CCGGTGGTGC ACCAGATGCC GGAAGGCATC 
AAGGCTGAAA CCCCGACGCA AACCGAAATC GTGATCAAGG GGATCGACAA GCAGAAAGTC 
GGCCAAGTGG CTGCGGAAGT CCGCGGCTAC CGTCCGCCCG AGCCGTACAA GGGCAAGGGC 
GTGCGCTATG CCGACGAGGT TGTGATCCTC AAAGAAACGA AGAAGAAGTA A 

 

Protein sequence

MSRVGKSPIA LQGAEVKLAD GAITVKGPLG TITQAVNPLV NVANNDGTLN LSPVDDSREA 
NALSGTMRAI IANAVHGVTK GFERKLTLVG VGYRAQAQGD KLNLSLGFSH PVVHQMPEGI 
KAETPTQTEI VIKGIDKQKV GQVAAEVRGY RPPEPYKGKG VRYADEVVIL KETKKK