Gene BMASAVP1_A3152 details

Gene Information

• Locus tag: BMASAVP1_A3152
• Symbol: rpsE
• ID: 4679908
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: -
• Start bp: 3125548
• End bp: 3126066
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639847408
• Product: 30S ribosomal protein S5
• Protein accession: YP_994439
• Protein GI: 121600075
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.0293332
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGA TGCAAGCGAA AGTTCAGGCT GACGAGCGCG ACGACGGCCT TCGCGAAAAA 
ATGATTTCGG TCAATCGCGT GACCAAGGTC GTGAAGGGTG GCCGTATTCT CGGCTTCGCC 
GCACTGACCG TGGTCGGCGA TGGCGACGGC CGCGTCGGCA TGGGCAAGGG CAAGGCGAAG 
GAAGTGCCGG TCGCCGTTCA GAAGGCGATG GAGCAGGCCC GCCGCAACAT GTTCAAGGTG 
CCGCTGAAGA ACGGTACGCT GCAGCACGAA GTGCACGGCA AGCACGGCGC GTCGACGGTT 
CTCCTCGCGC CGGCGAAGGA CGGTACCGGC GTGATCGCCG GCGGCCCGAT GCGCGCGGTG 
TTTGACGTGA TGGGCGTGCA GAACGTCGTC GCGAAGAGCC ACGGCTCGAC GAACCCGTAC 
AACCTCGTTC GCGCGACGCT GGACGGCCTG CGCAAGCAGT CGACCCCGGC CGACATCGCG 
GCGAAGCGCG GCAAGTCCGT CGAAGAAATT TTGGGCTAA 

 

Protein sequence

MAKMQAKVQA DERDDGLREK MISVNRVTKV VKGGRILGFA ALTVVGDGDG RVGMGKGKAK 
EVPVAVQKAM EQARRNMFKV PLKNGTLQHE VHGKHGASTV LLAPAKDGTG VIAGGPMRAV 
FDVMGVQNVV AKSHGSTNPY NLVRATLDGL RKQSTPADIA AKRGKSVEEI LG