Gene BMASAVP1_A3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A3146 
SymbolrpsM 
ID4681325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp3122727 
End bp3123092 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content62% 
IMG OID639847402 
Product30S ribosomal protein S13 
Protein accessionYP_994433 
Protein GI121599064 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.150463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTA TCGCAGGGGT TAACATCCCG AATCACCAGC ATACTGAAAT CGGCCTGACG 
GCGATTTTCG GTATCGGCCG CACGCGCGCG CGCAGCATCT GCGTGGCGTC GGGTGTGGCG
TTTTCGAAGA AGGTCAAGGA CCTGACCGAC GCAGACCTCG AAAAGCTGCG TGAAGAAGTG
GGCAAGTTTG TCGTCGAAGG CGATCTGCGC CGTGAAGTGA CGATGAACAT CAAGCGCCTG
ATGGATCTCG GCTGCTACCG CGGCGTCCGC CATCGCAAGG GTCTGCCCCT GCGCGGCCAG
CGTACGCGTA CGAACGCCCG CACCCGCAAG GGTCCGCGTC GCGCAGCGCA AGCGCTGAAG
AAATAA
 
Protein sequence
MARIAGVNIP NHQHTEIGLT AIFGIGRTRA RSICVASGVA FSKKVKDLTD ADLEKLREEV 
GKFVVEGDLR REVTMNIKRL MDLGCYRGVR HRKGLPLRGQ RTRTNARTRK GPRRAAQALK
K