| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2905 |
|---|
| Symbol | |
|---|
| ID | 4680315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 2892816 |
|---|
| End bp | 2894129 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639847163 |
|---|
| Product | AmpG-related permease |
|---|
| Protein accession | YP_994199 |
|---|
| Protein GI | 121600275 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00901] AmpG-related permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAC CGCCGCACGA CGCGCCCGCC CTCAACGCCC ACGAGGACCA TCCGGGCTGG
CGCGCGTTTC TGAACACGCA CATGCTGATC TGCGTCTTTC TCGGCTTCAC GTCGGGACTG
CCGCTCTTCA CGCTCGTCTA CCTGGTGCAG GCCTGGCTGC GCTCGGAAGG CGTGAATCTG
AAGGAAATCG GCCTCTTCGC GCTCATTCAG TTTCCCTATA CGTGGAAGTT CCTGTGGGCG
CCGCTGATGG ACCGCTTCAT CCCGCGCCTG CCCGGCTGGC GGCCGGGGCG GCGGCGCGGC
TGGATGTTCG TCACGCAGTT GCTCGTCGCG GGCGCGATCG CCGCGCTCGG CTTCGTGTCG
CCGCGCGAAT CGATCTGGAC GGTCGCCGCG CTGACGACGC TCGTCGCGTT CTTCGGCGCG
AGCGCCGACA TCGTGATCGA CGCATACCGC CGCGAGCTGC TGCGCGACAC CGAGCAGGGC
CTCGGCAACG CGGTGCACGT GAACGCGTAC AAGGTCGCCG CGCTGATTCC CGGCTCGCTG
TCGCTGATCC TGTCCGACCA TCTGCCGTGG GACGCCGTGT TCGCGCTCAC CGCCGCGTTC
ATGCTGCCCG GCATCCTGAT GACGCTCGTC GTGCGCGAGC CGGACGTGCA CGGCGCGCCG
CCGAAGAACC TGTCGGAAGC GGTGATCATG CCGTTTCGCG AATTCATCGG CCGCGACGGC
TGGCGCGGCG CGCTGCTCGT GCTCGGCTTC ATCTTCCTCT ACAAGCTCGG CGACACGATG
GCGACGACGC TTTCGACGTC GTTCTTTCTC GATCTCGGCT TCAACAAGAC GCAGATCGGC
GTGATCGCGA AGACGACCGC GTTCTGGGCG AGCCTCGCGG GCGGCATCAT CGGCGGCGTG
TGGCTCGTGA AGATTGGCAT CGCGCGCGGG CTATGGATCT TCGGGGTCCT GCAGATCGTG
TCGACGCTCG GCTTCGCGTG GCTCGCGAAG GCGGGCCCGG CCCCGGTGCT GATGGCCGCC
ATCTACGGCT TCGAGACGTT CTCGACGGGC CTCACGCTCG CCGCGTTCAC CGCATACATC
GCGAGCACGA CGGACCCGCG CTATACCGCG ACGCAGTTCG CGCTCTTCAC GAGCCTCGCG
TCGGTGCCGC GCACGCTCGC GTCGGCGTCA AGCGGCTTCA TCGTGGCGCA GATCGGCTGG
TTCGACTATT TCCTCGTCTG TGCGGCGCTC GGCATTCCCG GGATGCTGCT GCTGTTCAAG
ATCGCGCCGT GGAACGGCAG CATGTCAGGC AACGAGGCCG CCCGTGCAGG CTAA
|
|---|
| Protein sequence | MTKPPHDAPA LNAHEDHPGW RAFLNTHMLI CVFLGFTSGL PLFTLVYLVQ AWLRSEGVNL
KEIGLFALIQ FPYTWKFLWA PLMDRFIPRL PGWRPGRRRG WMFVTQLLVA GAIAALGFVS
PRESIWTVAA LTTLVAFFGA SADIVIDAYR RELLRDTEQG LGNAVHVNAY KVAALIPGSL
SLILSDHLPW DAVFALTAAF MLPGILMTLV VREPDVHGAP PKNLSEAVIM PFREFIGRDG
WRGALLVLGF IFLYKLGDTM ATTLSTSFFL DLGFNKTQIG VIAKTTAFWA SLAGGIIGGV
WLVKIGIARG LWIFGVLQIV STLGFAWLAK AGPAPVLMAA IYGFETFSTG LTLAAFTAYI
ASTTDPRYTA TQFALFTSLA SVPRTLASAS SGFIVAQIGW FDYFLVCAAL GIPGMLLLFK
IAPWNGSMSG NEAARAG
|
|---|
| |