Gene BMASAVP1_A2659 details

Gene Information

• Locus tag: BMASAVP1_A2659
• Symbol: lspA
• ID: 4681378
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 2636530
• End bp: 2637030
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639846917
• Product: lipoprotein signal peptidase
• Protein accession: YP_993956
• Protein GI: 121599113
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.261426
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAGA CCCTGTCGAA ATCCTCGGGT GGCGCGCTCG CGCCGTGGCT CGGCATCTCG 
CTGATCGTGA TCCTGTTCGA TCAGTTGACG AAGATCGCCG TGCTCAAGAC GTTCGCGTAC 
GGCGCGATGC ACGCGCTCAC GCCGTTCTTC AACCTGACGC TGATCTACAA CCGCGGCGCC 
GCGTTCGGCT TTCTCGCGAC GGCGGGCGGC TGGCAGCGCT GGGCGTTCAC CGCGCTCGGC 
ATCGGCGCGA CGCTCGTGAT CTGCTATCTG CTCAAGCGCC ACGGCCACCA GCGGCTCTTC 
AGCCTGTCGC TCGCGCTGAT TCTCGGCGGC GCGCTCGGCA ACGTGATCGA TCGCCTGATC 
TACGGTCACG TGATCGATTT CCTCGACTTC CACGTCGGCG CGTGGCACTG GCCCGCGTTC 
AATCTCGCCG ACTCCGCGAT CACGGTGGGC GCGGTGCTCC TCATCTACGA CGAGCTGCGT 
CGCGTGCGCG GCGCGCGCTA A 

 

Protein sequence

MAKTLSKSSG GALAPWLGIS LIVILFDQLT KIAVLKTFAY GAMHALTPFF NLTLIYNRGA 
AFGFLATAGG WQRWAFTALG IGATLVICYL LKRHGHQRLF SLSLALILGG ALGNVIDRLI 
YGHVIDFLDF HVGAWHWPAF NLADSAITVG AVLLIYDELR RVRGAR