Gene BMASAVP1_A2581 details

Gene Information

• Locus tag: BMASAVP1_A2581
• ID: 4678811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 2564594
• End bp: 2565223
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639846842
• Product: OmpA family protein
• Protein accession: YP_993883
• Protein GI: 121601320
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGCAT CCGCTTCGGC ACAGTCGGTG CCGGCGTCGC GACAAGCCGT GAATGACAAC 
TGGGTGAATG GCACGGGCGA ATGGGTGTGG ATGAACGGCA CGAACGAGCT CTGCTGGCGC 
GATGCGTTCT GGACGCCGGC CACCGCCAAC GCCAAGTGCG ATGGCGCACT GGTCGCCCAG 
GCACCGGCAC CGGCGCCGGT CGCACCGGTT GCTCCGGCCA TCACGAGCCA GAAGATTACG 
TACCAAGCCG ATACGCTGTT CGACTTCGAC AAGGCCGTCC TGAAGCCGGC CGGCAAGCAG 
AAGCTTGACG AACTGGCCGC GAAGATCCAG GGCATGAACG TCGAAGTGGT CGTGGCCACG 
GGCTACACGG ACCGCATCGG TTCGGACAAG TACAACGACC GTCTGTCGCT GCGCCGCGCG 
CAAGCCGTCA AGTCGTACCT CGTCAGCAAG GGTGTCCCGG CGAACAAGGT CTACACGGAA 
GGCAAGGGCA AGCGCAACCC GGTCACGGGC AACACCTGCA AGCAGAAGAA CCGCAAGCAG 
CTCATCGCCT GCCTCGCACC GGACCGCCGC GTGGAAGTCG AAGTGGTCGG CACGCAGGAA 
GTGCAGAAGA CGACCGTTCC GGCGCAGTAA 

 

Protein sequence

MAASASAQSV PASRQAVNDN WVNGTGEWVW MNGTNELCWR DAFWTPATAN AKCDGALVAQ 
APAPAPVAPV APAITSQKIT YQADTLFDFD KAVLKPAGKQ KLDELAAKIQ GMNVEVVVAT 
GYTDRIGSDK YNDRLSLRRA QAVKSYLVSK GVPANKVYTE GKGKRNPVTG NTCKQKNRKQ 
LIACLAPDRR VEVEVVGTQE VQKTTVPAQ