Gene BMASAVP1_A2434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2434 
Symbol 
ID4678560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp2428207 
End bp2429355 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content67% 
IMG OID639846694 
Productputative amino acid ABC transporter, periplasmic amino acid-binding protein 
Protein accessionYP_993739 
Protein GI121601308 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00891241 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTCC GCTCGTCACT GCCCTCCCTC GCCCTCGCCG CGGCATTCGC GTGCGGCGCA 
ACCGGCGCCG CGCGCGCCGC CGACGAAACG CCCGTGAGGA TCGGCTTCGC CGCGCCGCTC
ACGGGCGTCA ACGCGGGCTA CGGCAAGGAT CTGCAAAACG GCGTGCAGCT CGCGCTCGAC
GACGCCCGCG CGCAAAAGAT CACGATCGCC GGCAAGCCCG CGCGATTCGA ACTCGTCGTC
GAGGACGACC AGGCCGATCC GCGGATCGGC GTGCAGGCCG CGCAGAGCCT CGTCGACAAG
AAGGTGTCGG TCGTCGTCGG CCACTTCAAC TCCGGCACGA CGATTCCGGC GTCGGTCGTC
TACGACAAGG CGGGCATCCC CGTCATCGAT CCGGCCGCGA CGAATCCCGT CATCACGTCG
CGCGGGCTCG CGAACGTGTT CATGGTGATC GCCACCGACG GCCAGAACGC CGGCAACGCG
GGCCGCTACG CGGTCGACGT GACGAAGGCC AAGCGCATCG CGATCGTCGA CGATCGCACC
GCGTTCGGCC AGGGCGAAGC CGACGAGTTC GACAAGGCGG TGAAGGCCGC GGGCGCCGCG
ATCGTCGCGC GCGAGTACAC GAGCAACCAG GCGGTCGACT TCCGCGCGCA GATCACGAGC
CTCAAGAGCA AGAACGTCGA TCTGGTCTTC TTCGGCGGCC TCGATTCGCT CGCGGCGAAC
TTCATCAAGC AGATGAAACA GCTCGGCTTG AACGCGCAGT TCGTCGGCGG CGGCGGCGTG
AAGGACGCCG AGTTCATCAA GATCGCGGGC CCCGCAGCGG AAGGCGCGAT GGCGTGGGAA
TACGGCCGGC CGCTCGACCA GTTGCCGCAA GGCAAGGATT TCGAGTCGCG CTTCAAGAAG
CGCTTCGGCG TCGACGTGCT GTCGTATGCG CAGTTCGGCT ATGACGCGAC GTGGGCCGCG
ATCAAGGCGA TGCAGGCGGC GGGCACGACC GATCCGAGCG GCTATCGGCC CGCGCTGAAG
AAGATCGATT TCGAGGGCAT CACCGGCCGC ATCTCGTTCG GCGGCGACGG CTCGCTCAAG
AGCGGGATGT CGACGCTCTA TCAGGTGAAG AGCGGCGCGT GGCAGACGAT CGTCACGAAG
GGGGGCTGA
 
Protein sequence
MRLRSSLPSL ALAAAFACGA TGAARAADET PVRIGFAAPL TGVNAGYGKD LQNGVQLALD 
DARAQKITIA GKPARFELVV EDDQADPRIG VQAAQSLVDK KVSVVVGHFN SGTTIPASVV
YDKAGIPVID PAATNPVITS RGLANVFMVI ATDGQNAGNA GRYAVDVTKA KRIAIVDDRT
AFGQGEADEF DKAVKAAGAA IVAREYTSNQ AVDFRAQITS LKSKNVDLVF FGGLDSLAAN
FIKQMKQLGL NAQFVGGGGV KDAEFIKIAG PAAEGAMAWE YGRPLDQLPQ GKDFESRFKK
RFGVDVLSYA QFGYDATWAA IKAMQAAGTT DPSGYRPALK KIDFEGITGR ISFGGDGSLK
SGMSTLYQVK SGAWQTIVTK GG