Gene BMASAVP1_A2000 details

Gene Information

• Locus tag: BMASAVP1_A2000
• Symbol: mscL
• ID: 4680097
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 1976377
• End bp: 1976808
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 639846264
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_993316
• Protein GI: 121599349
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATCA TCAAGGAATT CAAGGAATTC GCCGTCAAGG GCAACGTCAT GGACCTCGCC 
ATCGGCGTGA TCATCGGCGG AGCGTTTTCG AAGATCGTCG ACTCGGTGGT GAAGGATCTC 
ATCATGCCCG TGATCGGCGT GCTGACGGGC GGCCTGGATT TCTCGAACAA ATTCGTGCTG 
CTCGGTCAGA TTCCGGCTTC GTTCAAGGGC AATCCGGAAT CGTTCAAGGA TCTGCAGGCA 
GCGGGCGTCG CGACGTTCGG CTACGGCTCG TTCATCACCG TGCTGATCAA TTTCATCATC 
CTCGCGTTCA TCATCTTCCT GATGGTCAAG TTCATCAACA AGCTGCGCAA GCCCGAGGAG 
GCCGCGCCCG CCGCGACGCC CGAGGACGTG CTGCTGCTGC GCGAGATCCG CGATTCGCTC 
AAGCAGCGCT GA 

 

Protein sequence

MSIIKEFKEF AVKGNVMDLA IGVIIGGAFS KIVDSVVKDL IMPVIGVLTG GLDFSNKFVL 
LGQIPASFKG NPESFKDLQA AGVATFGYGS FITVLINFII LAFIIFLMVK FINKLRKPEE 
AAPAATPEDV LLLREIRDSL KQR