| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1813 |
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| Symbol | |
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| ID | 4678602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 1799612 |
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| End bp | 1800781 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639846077 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_993132 |
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| Protein GI | 121600453 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.587957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATGCCC GTGCGGGCAA GTCAAACCGC GACGATTATA GCCCAAGCGC CAGCCCCGCC
GACGCTTCTG CGGGCGATTC GCTCGACGAC GATCTGACGA GCGACACGCT CGTCGCGCCC
GCGCGCGCCG ATACCGGCGC CGATGCGCCG CGCACCGTCG ACGTGCCGCT CGCGCTCGCG
GGCGAGCGCC TCGACAAGGC GCTCGCGCAG TTGTTTCCCG AGTTCTCGCG CAGCCGCCTG
CAGCAGTGGA TCGAGTCGGA CCGCGTGCGC GTCAGCGGCG CGCCGGCGAA GATCCGGCAG
CCCGTGCCGC TCGGCGCGAC GATCGAGCTG CTGCCCGAGC TGCTGCCCGA GCAACTCGCG
TTCACGCCGG AGCCGGTGCC GCTGTCGATC GTCTACGAGG ACGACACGAT CGTCGTCGTC
GACAAGCCGG CCGGCCTCGT CGTCCATCCT GCCGCCGGCA ACTGGAGCGG CACGCTGCTC
AACGGCCTGC TGCACCGCTA TGCGGATGCG GCCGGCCTGC CGCGCGCCGG CATCGTGCAT
CGGCTCGACA AGGAAACGTC GGGCCTGATG GTCGTCGCCC GCACGCTTGC CGCGCAGACG
GACCTGGTCC GTCAATTGCA GGCGCGCACG GTGAAGCGCC GCTATTTCGC GCTCGCGTGG
GGGCGGATGC CCGACGAGGG CACGATCGAT GCGCCGATCG GCCGCGATCC GCGCGAGCGC
ACGCGGATGG CGGTTGTCAC GGGCGCGGCG GGCAAGCCGG CGCGCACGCA TTTCCGCACG
GTCGACACGA CGCTGTGGGC GCGCCAGCCG GTATCGGCGA TCCATTGCGA TCTCGAAACC
GGACGCACGC ATCAGATCCG CGTGCATTGC GCGCACGTCG GGCATCCGCT GCTCGGCGAT
CCGGTGTACG GCCGCGCGCG CGGCAAGCGC TCGGTCGCGC CGCTGCCGGG CGGCTTCGCG
CGGCAGGCGC TGCACGCCTG GCGGCTCGGC CTCGTGCATC CGGCGAGCGG CCGGTCGATG
CAATGGCGCG CGCCGCTGCC GGCCGATCTC GCGGCGCTCG TCGACGCGCT CGGCTTCGGT
GCGGACGATG CGGAATTCGG CGACGATGAC GCTGTCTATG ACGACGGTTA CGATGAAGGC
ATGCCGTATG CCGACGATGA TGAGGATTGA
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| Protein sequence | MNARAGKSNR DDYSPSASPA DASAGDSLDD DLTSDTLVAP ARADTGADAP RTVDVPLALA
GERLDKALAQ LFPEFSRSRL QQWIESDRVR VSGAPAKIRQ PVPLGATIEL LPELLPEQLA
FTPEPVPLSI VYEDDTIVVV DKPAGLVVHP AAGNWSGTLL NGLLHRYADA AGLPRAGIVH
RLDKETSGLM VVARTLAAQT DLVRQLQART VKRRYFALAW GRMPDEGTID APIGRDPRER
TRMAVVTGAA GKPARTHFRT VDTTLWARQP VSAIHCDLET GRTHQIRVHC AHVGHPLLGD
PVYGRARGKR SVAPLPGGFA RQALHAWRLG LVHPASGRSM QWRAPLPADL AALVDALGFG
ADDAEFGDDD AVYDDGYDEG MPYADDDED
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