Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1703 |
Symbol | nodI |
ID | 4680414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1695642 |
End bp | 1696556 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639845970 |
Product | nodulation ABC transporter NodI |
Protein accession | YP_993029 |
Protein GI | 121600646 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTCG CACCCATCGA TTTTCAACAA GTCGAGAAAC GCTACGACGA CAAGCTCGTC GTCGACGGTT TGTCGTTTCA CGTGCAGCCC GGCGAATGCT TCGGTCTGCT CGGCCCGAAC GGCGCAGGCA AGACGACGAC GCTCAAGATG CTGCTCGGCA TCACGCACCC CGACGCAGGT TCGATCAGTC TGTGCGGCGA ACCCGTGCCG TCCCGCGCGC GGCACGCGCG GCAGCGCGTC GGCGTCGTGC CGCAGTTCGA CAATCTCGAT CCCGACTTCA CCGTTCGCGA GAACCTGCTC GTGTTCGCCC GCTACTTCGG ACTGACCGCC CACGCGGCGC GCGCGCTCGT GCCGCCGCTG CTCGAGTTCG CGAAGCTCGA AAGCAAGGCG GACGCGAAGG TGGGCGAGCT CTCGGGCGGG ATGAAGCGGC GGCTCACGCT CGCGCGCGCG CTCGTCAACG ATCCCGACGT GCTCGTGCTC GACGAGCCGA CGACGGGCCT CGATCCGCAA GCCCGGCACC TGATGTGGGA GCGGCTGCGC TCGCTGCTCG CGCGCGGCAA GACGATTCTG CTCACCACGC ACTTCATGGA AGAGGCCGAG CGTTTGTGCC ATCGCCTGTG CGTGATCGAG GAAGGCCGCA AGATTGCGGA AGGCGCGCCG CGCATGCTGA TCGAAGCGGA AATCGGCTGC GACGTGATCG AGATCTACGG GCCCGATCCC GTACAGCTTC GCGACGAGCT CGCGCCCTTC GCCGAGCGCA CCGAGATCAG CGGCGAAACG CTCTTTTGCT ACGTCGACAA TCCGGAGCCG ATCCACGCGC GCCTGAAAGG CCGCGCCGGC CTGCGCTATC TGCACCGCCC CGCGAATCTC GAAGACGTAT TCCTGCGGCT GACCGGCCGC GAGATGCTGG ATTGA
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Protein sequence | MSVAPIDFQQ VEKRYDDKLV VDGLSFHVQP GECFGLLGPN GAGKTTTLKM LLGITHPDAG SISLCGEPVP SRARHARQRV GVVPQFDNLD PDFTVRENLL VFARYFGLTA HAARALVPPL LEFAKLESKA DAKVGELSGG MKRRLTLARA LVNDPDVLVL DEPTTGLDPQ ARHLMWERLR SLLARGKTIL LTTHFMEEAE RLCHRLCVIE EGRKIAEGAP RMLIEAEIGC DVIEIYGPDP VQLRDELAPF AERTEISGET LFCYVDNPEP IHARLKGRAG LRYLHRPANL EDVFLRLTGR EMLD
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