Gene BMASAVP1_A1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A1680 
Symbol 
ID4681978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp1671183 
End bp1672631 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content71% 
IMG OID639845947 
Producttype II/III secretion system protein 
Protein accessionYP_993006 
Protein GI121600042 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4964] Flp pilus assembly protein, secretin CpaC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.427555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAGTG TGATCGACGC GATCGGCAAG CGGCGGCAAG CCGCATCGGC ATCGCCGCGC 
GCGCGGGCGT TCGCGGCGGG GCGGCGCGCG GCCGCCGCGG CGTTGTGGTG GCTCGCGCTC
GCGCTGGGCA TGGCGGTGGC GCCGAGATTC GCCCGCGCGG CGGACCTCGG CCCGGTGCTG
GCCGTGCCCG CCGGCGGCGG CGAGATGGTG AAGCTGCCGG CGCCGGCGGT CGCGGTGTTC
GTCGCGGACC CGGACGTCGC CGACGTGCAC GTGCCGACGC CGCAGGCGGT GTTCGTGCTC
GGCAAGAAAG CCGGCACGAC GACGCTCTTC GCGCTCGGCG CGAACAACCG GACGATTCTG
CGCGAGACGG TCGTCGTCGA TGTCGATACG CCGTCGCTGC AGCGCATTCT CGATGCGCGC
TTTCCGCAAC TGCGCCTGAC GCTCGCGGGC GCGCCGGGCT CGCTGATGGT GAGCGGCCGC
GTGCCGAGCG CGGCGGACGC GGACGCCGTC GTGCAGACGC TCAAGCCGTA CCTGCGCCAG
CAGGAAGCGC TCGTCAACCG GCTCACGCTC GCGCGGCCGA TCCAGGTGCA CCTGCGCGTG
CGCATCACCG AGGTCGACCG CAACATCACG CAGCAGCTCG GCATCAACTG GAGCGCGCTC
GGCGCGAGCG GCAACTTCGT CGGCGGCCTG TTCAACGGGC GCACGCTGTT CGACACGGCG
TCGAAGGCAT TCGATCTGTC GCCGTCGGGC GCGTTCTCGG TGGTGGGCGG CTTTCACACG
TCGCGCTACT CGATCGACGG CGTGCTCGAC GCGCTCGATC AGGAAGGCCT CATCACGATG
CTCGCCGAGC CGAACCTGAC CGCGATCTCC GGCCAGACCG CGAGCTTCCT CGCGGGCGGC
GAGTTTCCGA TTCCGGTCGC GCAGGACACG ACGGGCGCGA TCACGATCCA GTTCAAGCCA
TATGGCGTGT CGCTCGACTT CACGCCGACC GTGCTCGCCG ACAACCGGAT CAGCCTCAAG
GTGCGCCCGG AGGTGAGCGA GATCGATCCG ACCAACAGCG TGACGACGGG CAGCATCAAG
GTGCCGGCGC TGACGGTGCG TCGCGTCGAC ACGACGGTCG AGCTGTCGAG CGGGCAGAGC
TTCGCGATCG GCGGGCTCCT GCAGAGCAAG AGCAGCGACG TGCTCGCCGA GCTGCCGGGC
CTCGCGCGGC TGCCCGTGCT CGGCAAGCTG TTCTCGTCGC GCAACTACCT GAACGACAAG
ACCGAGGTCG TCGTGATCGT CACGCCCTAC ATCGTGCAGC CGGCGAACCC GGGCGAGCTG
CGCGACGCGC TCGACGACGT CACGCGCCCA AGCAGCGACA TCGAGTTCGT GCTGCAGCGC
TCGCTCGGCA TCGATCCGCT CGGCGGCGAT GCGCCGCGGC TCGCGGGCCC GGCGGGGTTC
GTCTACTGA
 
Protein sequence
MWSVIDAIGK RRQAASASPR ARAFAAGRRA AAAALWWLAL ALGMAVAPRF ARAADLGPVL 
AVPAGGGEMV KLPAPAVAVF VADPDVADVH VPTPQAVFVL GKKAGTTTLF ALGANNRTIL
RETVVVDVDT PSLQRILDAR FPQLRLTLAG APGSLMVSGR VPSAADADAV VQTLKPYLRQ
QEALVNRLTL ARPIQVHLRV RITEVDRNIT QQLGINWSAL GASGNFVGGL FNGRTLFDTA
SKAFDLSPSG AFSVVGGFHT SRYSIDGVLD ALDQEGLITM LAEPNLTAIS GQTASFLAGG
EFPIPVAQDT TGAITIQFKP YGVSLDFTPT VLADNRISLK VRPEVSEIDP TNSVTTGSIK
VPALTVRRVD TTVELSSGQS FAIGGLLQSK SSDVLAELPG LARLPVLGKL FSSRNYLNDK
TEVVVIVTPY IVQPANPGEL RDALDDVTRP SSDIEFVLQR SLGIDPLGGD APRLAGPAGF
VY