Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1677 |
Symbol | |
ID | 4680409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1667928 |
End bp | 1669490 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639845944 |
Product | CpaF |
Protein accession | YP_993003 |
Protein GI | 121600306 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.521474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGGCC GGCGTCCGGC CGCTTCATTC GCGCCCGGCG ACGCCGGCGG CGCGCGCGAG TTCGTGCCCG ACGCCGTGTC GGCGGGCGCG GGCGCGGCGC CGGCCGGCGG CCACGCATCG GCGCCCGACG CGGGCGGCGC GGCACGCGCG CGCGAGCCGG CCGGCGCATC GGGCGCGAGC GCGCCCGGCG GGGCGCCGCA GTCCGGCGTC GCGCCAAGCG GCCATCGGCC CGCATCGCGT GACGACCGCA TCGATCGCGA TGACGGCCAC GACCGCGCGC CCGCGCAAGA CCACCACGAG GCGCTGATCC GCTCGGAGAC GTTCAAGACG ATCCGCGCGG TCGTGTTCTC GTCGATGAAC ATGTCGGCCG CGCTGATGAT GTCGCGCGCC GAAGTGCGCG AAGGCATCGA GCAGGCGGCC GCCGACGTGA TCGCGCGCGA GCGGCTGACG GTGACGCTCG CCGAGCAGGC GCTCATCGTC GACGAGATCC TCAACGACAT GTTCGGCGTC GGGCCGATCG AGCCGTTGCT CGCCGACGAA CGCGTGACCG ACATCCTCGT CAACGGCCCC GATCAGGTGT ACGTCGAGCG CGCGGGCAAG CTCGAGCTCA CGCCGCTGAA GTTCCGCGAC AACGCGCACG TGATCAACGT CGCGCAGCGG ATCGCGGCGG CGGTCGGGCG GCGCGTCGAC GAGAGCAGCC CGATGGTCGA CGCGCGGCTC GCGGACGGCA GCCGCGTGAA CGTCGTGCTG CCGCCGATCG CGATCCGCGG CGCGTCGATC TCGATCCGCA AGTTCGCCAA GCGCAACATC ACGCTCGCGC GGATGGCGCA GCAGGGCAAC CTGTCGCAGG CGATGGTCGA GGTGCTGAAG ATCGCGAGCG CGTGCCGGCT GAACATCGTG ATCTCGGGCG GCACGGGCTC CGGCAAGACG ACGCTGCTGA ACGCGCTGTC GCACTTCATC GATTCGCACG AGCGCATCGT GACGATCGAG GACGCCGCGG AGCTGCAATT GCAGCAGCCG CACGTCGTGA GCCTCGAGAC GCGCCCGGAG AACAGCGAGG GGCTGGGCGG CGTGTCGCAG CGCGATCTCG TGCGCAACGC GCTGCGCATG CGCCCCGATC GCATCATCCT CGGCGAGACG CGCGGCCCGG AGGCGTTCGA CGTGCTGCAG GCGATGAACA CCGGGCACGA CGGCTCGATG ACGACGATCC ACGCGAACAC GCCGCGCGAT GCGATCACGC GCCTCGAGAG CATGGTGATG ATGGCCAACG GCAACCTGCC GCTCGTGTCG ATCCGCCGGC AGATCGCGAG CGCGGTGCAC ATGATCCTGC AGATCGAGCG CATGCGCGAC GGCGTGCGGC GCGTCACGCG CGTGACCGAG ATCGCCGGCA TGGAGGGCGA TGTCGTGATC ACGCAGGATC TGTTCGCGTT CCGCTACGAC GCGAGCGCGT TCCAGGAGCA GGTGCACGGA ATGTTCGAAT CGTCGTCGCT GCGCCCGGCG TTCGCGCAGC GCGCCGCGTA TTACGGCCTC GAGGGCGCGC TGCTCGGCGC GTTGCAACCG TGA
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Protein sequence | MFGRRPAASF APGDAGGARE FVPDAVSAGA GAAPAGGHAS APDAGGAARA REPAGASGAS APGGAPQSGV APSGHRPASR DDRIDRDDGH DRAPAQDHHE ALIRSETFKT IRAVVFSSMN MSAALMMSRA EVREGIEQAA ADVIARERLT VTLAEQALIV DEILNDMFGV GPIEPLLADE RVTDILVNGP DQVYVERAGK LELTPLKFRD NAHVINVAQR IAAAVGRRVD ESSPMVDARL ADGSRVNVVL PPIAIRGASI SIRKFAKRNI TLARMAQQGN LSQAMVEVLK IASACRLNIV ISGGTGSGKT TLLNALSHFI DSHERIVTIE DAAELQLQQP HVVSLETRPE NSEGLGGVSQ RDLVRNALRM RPDRIILGET RGPEAFDVLQ AMNTGHDGSM TTIHANTPRD AITRLESMVM MANGNLPLVS IRRQIASAVH MILQIERMRD GVRRVTRVTE IAGMEGDVVI TQDLFAFRYD ASAFQEQVHG MFESSSLRPA FAQRAAYYGL EGALLGALQP
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