Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1641 |
Symbol | rbsA |
ID | 4679585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1635255 |
End bp | 1636859 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639845908 |
Product | carbohydrate ABC transporter ATP-binding protein |
Protein accession | YP_992967 |
Protein GI | 121600812 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0578251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGCC CGCGCGACGA GGCCGACGAC ATGGACGAAG CGAGCGGCGC GGCGCGCGCG CCTGACGAAG CGAGCGAGGA GGCGATGGAC ACGATACTGG CGCTCACCGG CATCACGAAG CGGTTTCCCG GCGTCGTCGC GCTGCGCGGA ATCGATCTGC GCGTCGCGCG CGGCGAGATT CACGCGCTGC TCGGCGAGAA CGGCGCGGGC AAGTCGACGC TGATGAAGAT CCTCTGCGGG ATCCACCCGC CGGACGAGGG CGTGATCGCG CTCGACGGCG AGCCGCGGCG CTTCGCGAAC CATCACGACG CGATCGCGGC GGGCGTCGGC ATCGTGTTTC AGGAGTTCAG CCTGATTCCG GAGCTGAACG CGGTCGACAA TCTGTTCCTC GGCCGCGAGT GGCGCGGCCG GCTCGGGCTG CGCGAGCGCG CGCGGATGCG CCGCGCGGCG GCGGACATCT TCGCGCGGCT CGACGTCGCG ATCGATCTGT CGGCGCCGGT GCGCGAGCTG TCGGTCGCGC AGCAGCAGTT CGTCGAGATC GGCAAGGCGC TGTCGCTCGA CGCGCGGCTG CTGATCCTCG ACGAGCCGAC CGCGACGCTC ACGCCCGCCG AAGCCGCGCA CCTGTTCGGC GTGATGCGCG AGCTCAAGCG CCGGGGCGTC GCGATGATCT TCATCTCGCA CCACCTCGAC GAGATCTTCG AGGTGTGCGA TCGGATCACC GTGCTGCGCG ACGGGCAATA CGTCGGCACG ACCGAGGTCG CGCGCACCGA TGTCGGCGCG CTCGTCGAGA TGATGGTGGG CCGGCGCATC GAGCAGAGCT TTCCGCCGAA GCCGCGTCTT GCGCGCGACG CCGCGCCCGT GCTCGAGGTG GACGCGCTGC AGGTGCGCGA GAACGGCCCC GTGAACCGCT TCGCGCTGCG CGAGGGCGAG ATTCTCGGCT TCGCGGGCCT CGTCGGCTCC GGGCGCACGT CGAGCGCGCT CGCGCTGATC GGCGCGAAGC CCGCGCGCGT GCGGCGAATG CGCGTGCGCG GCCGCCCGGT GCGCCTCGCC GATCCCGCCG CCGCGCTCGC CGCGGGCATC GGCCTCCTGC CGGAGAGCCG CAAGACGCAG GGGCTCATCC CCGCGTTCTC GATCCGGCAC AACATCGCGA TCAACAACCT CGGCAAGCAC CGCCGGCTGC GCTGGTTCGT CGACGCGGCG GCCGAGACGC GCACGACGCT CGAGCTGATG CAGCGGCTCG GCGTGAAGGC GCCGACGCCG CACACGCGCG TCGACACGCT CTCGGGCGGC AATCAGCAGA AGGTCGTGAT CGCGCGCTGG CTCAACCATC ACACGCGGAT CCTGATCTTC GACGAGCCGA CGCGCGGCAT CGACATCGGC GCGAAGGCGG AAATCTATCA ACTGATGCGC GAGCTGAGCG CGCGCGGCTA TTCGATCGTG CTGATCTCGA GCGAGTTGCC GGAGATCGTC GGCCTGTGCG ATCGCGTCGC GGTGTTCCGG CAGGGCCGTA TCGAGGCGAT GCTCGAAGGC GAGGCGATCG AGCCGAACAC GGTGATGACC TATGCGACTT CCGACGTACG CGGAGCGAAT CATGAACATG CATGA
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Protein sequence | MSGPRDEADD MDEASGAARA PDEASEEAMD TILALTGITK RFPGVVALRG IDLRVARGEI HALLGENGAG KSTLMKILCG IHPPDEGVIA LDGEPRRFAN HHDAIAAGVG IVFQEFSLIP ELNAVDNLFL GREWRGRLGL RERARMRRAA ADIFARLDVA IDLSAPVREL SVAQQQFVEI GKALSLDARL LILDEPTATL TPAEAAHLFG VMRELKRRGV AMIFISHHLD EIFEVCDRIT VLRDGQYVGT TEVARTDVGA LVEMMVGRRI EQSFPPKPRL ARDAAPVLEV DALQVRENGP VNRFALREGE ILGFAGLVGS GRTSSALALI GAKPARVRRM RVRGRPVRLA DPAAALAAGI GLLPESRKTQ GLIPAFSIRH NIAINNLGKH RRLRWFVDAA AETRTTLELM QRLGVKAPTP HTRVDTLSGG NQQKVVIARW LNHHTRILIF DEPTRGIDIG AKAEIYQLMR ELSARGYSIV LISSELPEIV GLCDRVAVFR QGRIEAMLEG EAIEPNTVMT YATSDVRGAN HEHA
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