Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1424 |
Symbol | |
ID | 4681568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1393915 |
End bp | 1394928 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639845695 |
Product | LysR family transcriptional regulator |
Protein accession | YP_992756 |
Protein GI | 121598671 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.18619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCGATC ATTCTCGAAA AATGAATAAT TCAGATTCGA TCCATCCCAC GGAGAGAATC ATGGATCTGG CGGCTCTCGC GATCTTTCGC GCGGTCGTGC GCGAGAACGG CGTGACGCGC GCGGCGGCAA AGCTCAACCG TGTGCAATCG AACGTCACGA CGCGCATCAA GCAACTGGAG GAGCAGCTCG GCGCGCCGCT TTTCGTGCGC GACGGCCGCC GGCTCGTGCT CACCCCGGCC GGCGAGACGC TGCTGCCGTA TGCGGAGCGT CTGCTCGCGC TCGCCGACGA GGCGCGCCAC GCGGTCACCG AAAACCGGCC GCACGGCCGG TTGCGGCTCG GCGCGATGGA AAGCACCGCG GCGAGCCGCC TGCCCGCCTT GCTCGCCCGC TACCACCAGG CGTGGCCCGA CGTCACGCTC GAGCTCGTCA CCGGCACGAC GGGCAAGCTG ATCGGTCTCG TGCGCGACTT CGAGCTCGAC GCCGCGCTCG TCGCGACGCC GGCCGGCTCC GAGGCGCTCG GCGAGCCGTT CGAGACGGCG TCCGCGTTCA CCGAAGAACT GGTGCTGCTC ACGCCGCGCG GCCATCCGCG CGTGCGCACG CCGCGCGACG TGCGGCTGCC GACGCTCGTC GCGTTCGAGC GCGGCTGCGC GTACCGCGGC TGCGTCGAGC GCTGGTACGC GGCGGAGGGG CTGAAGCCCG AGCGCGTGCT CGAACTCGGC TCGTATCACG CGATCGTCGC GTGCGTCGCG GCGGGCGCGG GCGTCGCGGT CGCGCCGCGC TCGGTGCTCG CCGTCCAGCG CGAGCCGGAC AGCCTCGGCG TGCACCCGAT CGACGGCATG CCGCCGATCG ATACGATGCT CGTCTGGCGC CAGGGGCATT TCTCGGCGGC GCTCGCCGCG CTGCGCGACG CCGCCGCCGC GGCGAACGCC ACCGACGTCG CGGCGCACGA AGCGGCGAAG GTCGCGCCCC GGCGCACGCG GCGCGGCGCC GCGCGCGAAA CACTGCCGGC TTGA
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Protein sequence | MTDHSRKMNN SDSIHPTERI MDLAALAIFR AVVRENGVTR AAAKLNRVQS NVTTRIKQLE EQLGAPLFVR DGRRLVLTPA GETLLPYAER LLALADEARH AVTENRPHGR LRLGAMESTA ASRLPALLAR YHQAWPDVTL ELVTGTTGKL IGLVRDFELD AALVATPAGS EALGEPFETA SAFTEELVLL TPRGHPRVRT PRDVRLPTLV AFERGCAYRG CVERWYAAEG LKPERVLELG SYHAIVACVA AGAGVAVAPR SVLAVQREPD SLGVHPIDGM PPIDTMLVWR QGHFSAALAA LRDAAAAANA TDVAAHEAAK VAPRRTRRGA ARETLPA
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