| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1399 |
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| Symbol | |
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| ID | 4681008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 1365140 |
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| End bp | 1367488 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639845670 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_992731 |
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| Protein GI | 121601601 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCATCG CATTCGCGGC GGCGGGGCAC GCGCGCGCGG GCGAGACGGC GACGCTCGCG
GACAGCTTCG GCCGCGCGCT GCCGCCCGTG GGGGGCACGG CGGCGCACGG CACGCTGTAT
CTCGAGCTCG TCGTGAACGC GCTGTCGACG GGGCGCATCG TGCCGGTTCG CTATCGCGAC
GGCATCTACT ACGCGCGCGC GGGCGATCTC GCGCAGGCGT CGGTGCGCAC GGGCGCGCAG
CCCGATGCGC TCGTCGATCT GTCGAGGCTC GACGGCGTGC AGGTCGAATA CGAGAGCGCC
GAGCAGCGCC TGAAGCTCAC CGTGCCGCCC GACTGGCTGC CGCGCCAGAC GCTCGGTTCG
CCGCGGCTGT ACGACCGCAC GCCCGCGGCC GTCAGCTTCG GGCTCCTGTT CAATTACGAC
GTGTATGCGA ATTCGCCGAC GCTCGGCACG AGCTACACGT CCGCATGGAC CGAGCAGCGG
CTGTTCGACC GATGGGGCAC CGTGACGAAC ACGGGCGTCT ACCGGCGCGA TTACGGTGGC
GGCGCCGGCG GCGTCGGGAG CAACCGCTAT CTGCGCTACG ACACGTTCTG GCGCTATTCG
GACCAGGACC GGCTGCGCAC GTACACCGCG GGCGACGTGA TCACGGGCGC GCTGTCGTGG
TCGAGCGCCG TGCGCTTGGG GGGCGTGTCC GTCGAGCGCG ATTTCAAGGT GCGGCCCGAC
ATCGTCACCT ATCCGCTGCC GCAGTTCTCG GGCCAGGCCG CGGTGCCCAC CGCGGTCGAT
CTGTTCATCA ACGGCAGCAA GACGACGACG GGGCAGGTGA ATCCCGGCCC GTTCACGATG
AACAACGTGC CGTTCATCAA CGGCGCCGGC GAGGCGACCG TCGTCACGAC CGACGCGCTC
GGCCGTCAGG TGGCGACGAC GATTCCGTTC TACGTCGCGA ACACGCTGCT GCAAAAAGGG
CTCTCCGATT ATTCGCTGTC GGCGGGCGCG ATGCGGCGCG ACTACGGGAT CCGCTCGTTC
TCGTACGGCA AGTTCGCGGC GTCGGGCACC GCGCGTCACG GCCTGACCGA TTACCTGACG
CTCGAGGGCC ACGTGGAGGG CGGCGAGCGC TTCGCGCTCG GCGGGCTCGG GTTCGACCTC
GGCATCGGCA TGTTCGGCGT GCTCGGTGTC GCGGCGACGC AGAGCCGCCT CGCCGGTGCG
TCGGGCCGGC AATACGCGTT CGGCTACAGC TACGCGTCGC AGCGGTTCAG CGTGTCGCTG
CAGCGCATCC AGCGCACGAA CGGGTTTCGC GACCTGTCGG TGTACGACCT GCCGGCGAAC
GTCGCGTACC GGCTCGTGCG CAGCAGCACG CAGGCGACGG GCGCGCTCAA TCTCGGCGCG
CTCGGCGGCA CGCTCGGCGC TGGCTACTTC GATGTGCGCG GCGCGGACGG CGCGCGCACG
CGGATCGCGA ACCTGTCGTA TACGCGGCCG CTATGGCGGC GCGCGACGCT CTACGCATCG
GTCAACAAGA CGGTCGGCGA GCACGGCGTG GCCGCGCAAC TTCAACTGAT CGTGCCGCTC
GGCGAGCCGG GCGTCGTGAC GGGCGCGCTC GCGCGCGACG CGAACAACAG TTTCAGCGAG
CGCGTGCAGT ACAGCCGCAG CGTGCCGAGC GACGGCGGCC TCGGCTGGAA TCTCGCGTAC
GCGGGCGGCG GCTCGCATTA TCAGCAGGCG GATGCGACGT GGCGCAACCG CTACTTCCAG
GCGCAGGGCG GCGTGTACGG CTACGGCGCG GGGCGCGGCT ACGCGCGCTG GGGCGAGGTG
CAGGGCTCGG TCGTCGTGAT GGACGGCGCG GTGCTGCCCG CGAACCGTGT CGACGATGCG
TTCGTGCTGA TCGATACGCA GGGCCGCGGG GGCGTGCCGG TGCGCTACGA GAATCAGCTC
GTCGGCAAGA CCGACGGCGG CGGCCACCTG CTCGTGCCGT GGGCGCCGTC GTATTACGCG
GGCAAGTACG AGATCGATCC GCTCGACCTG CCGAGCAACG TGCGCGCGCC GATCGTCGAG
CGCCGCGTCG CGGTGCGCGA CCACGGCGGT GCGCTCGTCA CGTTCCCGAT CCGCAGGATC
GTCTGCGCGC AGATCGCGCT CGTCGACGCG GCGGGCCGGC CGGTCGCCAT CGGCTCGCGC
GTGCTGCACG AGGAGAGCGG CGAGACCGCG CTCGTCGGCT GGCAGGGCGA GACCTATCTC
GAAGGCTTGT CCGCGCTCAA CCACCTGCGC GTGCGGACGC CCGACGGCCG CACCTGCCGC
GCGACGTTCG CAGCCGACGT CGACGCGGCG CAGATGAGCC GCGTCGGCCC GCTCGCGTGC
GGCGAATAA
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| Protein sequence | MGIAFAAAGH ARAGETATLA DSFGRALPPV GGTAAHGTLY LELVVNALST GRIVPVRYRD
GIYYARAGDL AQASVRTGAQ PDALVDLSRL DGVQVEYESA EQRLKLTVPP DWLPRQTLGS
PRLYDRTPAA VSFGLLFNYD VYANSPTLGT SYTSAWTEQR LFDRWGTVTN TGVYRRDYGG
GAGGVGSNRY LRYDTFWRYS DQDRLRTYTA GDVITGALSW SSAVRLGGVS VERDFKVRPD
IVTYPLPQFS GQAAVPTAVD LFINGSKTTT GQVNPGPFTM NNVPFINGAG EATVVTTDAL
GRQVATTIPF YVANTLLQKG LSDYSLSAGA MRRDYGIRSF SYGKFAASGT ARHGLTDYLT
LEGHVEGGER FALGGLGFDL GIGMFGVLGV AATQSRLAGA SGRQYAFGYS YASQRFSVSL
QRIQRTNGFR DLSVYDLPAN VAYRLVRSST QATGALNLGA LGGTLGAGYF DVRGADGART
RIANLSYTRP LWRRATLYAS VNKTVGEHGV AAQLQLIVPL GEPGVVTGAL ARDANNSFSE
RVQYSRSVPS DGGLGWNLAY AGGGSHYQQA DATWRNRYFQ AQGGVYGYGA GRGYARWGEV
QGSVVVMDGA VLPANRVDDA FVLIDTQGRG GVPVRYENQL VGKTDGGGHL LVPWAPSYYA
GKYEIDPLDL PSNVRAPIVE RRVAVRDHGG ALVTFPIRRI VCAQIALVDA AGRPVAIGSR
VLHEESGETA LVGWQGETYL EGLSALNHLR VRTPDGRTCR ATFAADVDAA QMSRVGPLAC
GE
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