| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1040 |
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| Symbol | |
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| ID | 4681069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 1020859 |
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| End bp | 1022307 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639845314 |
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| Product | DEAD/DEAH box helicase |
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| Protein accession | YP_992380 |
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| Protein GI | 121599991 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.33431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATT CTGTTGCCAA GCCTGTCGAC GCGACGTTCG ATCAATTCGG CCTTGCCGCC
GAGATCCTGA AGGCGATTGC CGAGCAGGGC TATACGACGC CGACGCCGAT CCAGGCGAAG
GCGATTCCCG TCGTGCTGTC CGGCCGCGAC GTGATGGGCG CCGCGCAGAC CGGCACCGGC
AAGACCGCGA GTTTCTCGCT GCCGATCATC CAGCGGCTGC TGCCGCAGGC GAACACGAGC
GCGTCGCCCG CGCGCCACCC GGTGCGCGCG CTGATCCTCA CGCCGACCCG CGAGCTTGCC
GATCAGGTCG CCGCGAACGT GCACGCGTAT GCGAAGCACA CGCCGCTGCG CAGCGCGGTC
GTGTTCGGCG GCGTCGACAT GAACCCGCAA ATGGCCGAGC TGCGCCGCGG CGTCGAGATC
CTGATCGCGA CGCCCGGGCG CTTGCTCGAT CACGTCCAGC AGAAGACCGC GAATCTCGGC
CAGGTGCAGA TCCTCGTGCT CGACGAGGCC GACCGGATGC TCGACATGGG CTTCCTCCCC
GATCTGCAGC GCATCCTGAA CCTGCTGCCG AAGGAGCGTC AGACGCTGCT TTTCTCGGCG
ACGTTCTCGC CCGAGATCAA GAAGCTCGCG TCGACCTACC TGCGCAATCC GCAGACGATC
GAGGTCGCGC GCAGCAACGC GGCCGCGTCG ACCGTCACGC AGATCGTCTA CGACGTCGCC
GAAGGCGACA AGCAGGCGGC CGTCGTCAAG CTGATCCGCG ACCGCTCGCT CAAGCAGGTG
ATCGTGTTCT GCAACAGCAA GATCGGCGCG AGCCGCCTTG CGCGCCAGAT CGAGCGCGAC
GGCATCATCG CGGCCGCGAT TCACGGCGAC CGCTCGCAGA GCGAGCGGAT GCAGGCGCTC
GACGCGTTCA AGCGCGGCGA GATCGAAGCG CTCGTTGCGA CCGACGTCGC CGCGCGCGGC
CTCGACATCG CCGAATTGCC GGCCGTCATC AATTTCGACC TGCCGTTCAA CGCGGAAGAC
TACGTGCACC GGATCGGCCG CACGGGGCGT GCGGGCGCGT CGGGCGACGC GCTGTCGCTG
TGCAGCCCGA ACGAGCGCAA GCAGCTCGCC GACATCGAGA AACTGATCAA GCGGACGCTG
TCGCTCGAAA CGCTCGCGCT CGATCTGCCG CGCCATCGCC ACGACGATCG GGGCGGCCGC
CGCGAGCGCG ACCGCGACGA GCGCCGCGGC GCGCCGGCCG GCCGCCGTTC GGCGGGCGGC
GAGCGCACGC ATCATCCGCG CCGCGAAGCG CCGATCGACG ATTTTTTCCT GAAGCCGTAC
GTGCCGTCGC CGTCCGCGAA CCAGCCGGAC GAGGCGAAGC CCGTGCAGCC GGAGAAGAAG
GCGCCGAAGC AGCCGCTCGC CGCGCTCCTG GGCGGATTCG GGATGCCGCG CAAGACGTCG
TCGTCGTGA
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| Protein sequence | MSDSVAKPVD ATFDQFGLAA EILKAIAEQG YTTPTPIQAK AIPVVLSGRD VMGAAQTGTG
KTASFSLPII QRLLPQANTS ASPARHPVRA LILTPTRELA DQVAANVHAY AKHTPLRSAV
VFGGVDMNPQ MAELRRGVEI LIATPGRLLD HVQQKTANLG QVQILVLDEA DRMLDMGFLP
DLQRILNLLP KERQTLLFSA TFSPEIKKLA STYLRNPQTI EVARSNAAAS TVTQIVYDVA
EGDKQAAVVK LIRDRSLKQV IVFCNSKIGA SRLARQIERD GIIAAAIHGD RSQSERMQAL
DAFKRGEIEA LVATDVAARG LDIAELPAVI NFDLPFNAED YVHRIGRTGR AGASGDALSL
CSPNERKQLA DIEKLIKRTL SLETLALDLP RHRHDDRGGR RERDRDERRG APAGRRSAGG
ERTHHPRREA PIDDFFLKPY VPSPSANQPD EAKPVQPEKK APKQPLAALL GGFGMPRKTS
SS
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