Gene BMASAVP1_A1024 details

Gene Information

• Locus tag: BMASAVP1_A1024
• ID: 4682002
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 1005537
• End bp: 1006169
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 639845298
• Product: TetR family transcriptional regulator
• Protein accession: YP_992364
• Protein GI: 121601118
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.420909
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAGC CAAAAATCAA AAGAGACCCA GAGGGAACCC GGCGCCGGAT CCTGCTCGCG 
GCGGCCGAAG AGTTCGCGAC AGGGGGGCTG TTCGGTGCGC GAGTCGACCA GATCGCGCGC 
CGCGCCGAGA CCAACGAGCG GATGCTCTAT TACTACTTCG GCAGCAAGGA GCAATTGTTT 
ACCGCGGTGC TCGAATACGC GTTTTCCGCG CTGATGGAGG CCGAGCGGGC GATCGATCTC 
GAAGGCGTCG CGCCCGTCGA GGCGATCACG CGGCTCGCGC ATTTCGTGTG GGACTACTAT 
CGCGATCATC CCGATTTGCT GCGCCTGCTC AACAACGAGA ATCTGCACGA GGCGCGCTAT 
TTGCAGAAAT CGACGCGCAT CCGCGAGATG ATCTCGCCGA TCGTCAAGAC GCTCGACGGC 
GTGCTCGAGC GCGGCCAGAA GGCGGGGCTC TTTCGCACGG ACATCGATTC GCTGCGGTTC 
TACGTGACGC TGTCGGGGCT CGGCTACTAC ATGGTGTCGA ACCGCTTCAC GCTCGCCGCG 
ATCTTCGGCC GCGATTTCAG CGCGCAGCAC GAGCGCGCCG AGATGGTCAA GATGAACACC 
GAGTTGCTGC TCGCGTTTCT GTTGAGGCGC TGA 

 

Protein sequence

MNQPKIKRDP EGTRRRILLA AAEEFATGGL FGARVDQIAR RAETNERMLY YYFGSKEQLF 
TAVLEYAFSA LMEAERAIDL EGVAPVEAIT RLAHFVWDYY RDHPDLLRLL NNENLHEARY 
LQKSTRIREM ISPIVKTLDG VLERGQKAGL FRTDIDSLRF YVTLSGLGYY MVSNRFTLAA 
IFGRDFSAQH ERAEMVKMNT ELLLAFLLRR