Gene BMASAVP1_A0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0928 
Symbol 
ID4679803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp922167 
End bp923582 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content59% 
IMG OID639845202 
Productputative lipopolysaccharide ABC transporter, ATP-binding protein 
Protein accessionYP_992268 
Protein GI121599624 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGATGT CCTCTGAATT GCCGGCAATC AGCGTCCAAG ACGTCAGCAA GCGCTTTCGC 
GTATTTGCCA AGCCGGCAGA CCGTCTGAAG GCCGCAGTTC GGCATCGCAT CGGCGGTCTC
GCGAAGTTGG TGCCCGCTCG TTTGCTCGGA ACGGAAGGTG CAAGCGAGTT TCATGCGCTG
CAGCATGTGT CGTTTCACGT ACAAAAGGGC GAGACGATCG GAATCATCGG CCGCAACGGC
TCGGGAAAGT CGACGTTGTT GCAGATCATC TGCGGGACGC TCACGCCGTC GGGTGGCCGG
GTTGCGATCA ACGGGCGCGT CGCCGCGCTG CTCGAACTCG GAGCGGGCTT CAATCCGGAG
TTCACTGGCC GCGAAAACGT ATACATGAAC GCGGCGTTGC TGGGCCTCTC GAAAGCCCAG
ATCGAGGAGC GGCTCGACGC CATCTTCGCT TTTGCCGATA TTGGCGGCTT CGTGGATCAA
CCGGTGAAGA CCTATTCGAG CGGCATGTAC GTGCGGCTTG CTTTTGCCGT CATTGCGCAC
GTCGACGCCG ACGTGCTCGT GATCGACGAA GCGTTGGCCG TCGGGGACGC ATTCTTCACG
CAAAAGTGCA TGCGTTTTCT GCGCGCGTTC ATGGAGCGGG GCACCGTTTT ATTTGTCAGC
CACGATACGA ACGCGGTGGT CAATCTCTGT ACCCGCGTCG TATGGCTTGA CAAGGGGCGC
GTTCGCGAAA TCGGTCCGGC AAAGGACGTT TGCGACTCGT ATCTTGAGGC TTTCTACGAG
GAGCAGCATT GCGCATCGGG GCGAAGCGTT CGCGCGCTTG AGCGCAGCAG TGTCGTGCGC
GCAATAGCCG AAGGCGATAT GCGCGACCAG CGCGCATTGC TCATCAACGC GTCGAAGCTG
CGCAACGACG TGGAGTTGTT CCAGTTCACT GCCGACGCGA AGAATTTCGG TCTTGGCGGC
GCATCGATTG AGCATGTCGG CATCGAGGAT GGCACGGGGG CGCCGCTGAA TTGGGTAGTG
GGAGGCGAGA TCGTTTGCAT CCGCATCGCC GTCAAAGCCC TGCAGAACCT GGAGCGTGCC
ATCGTCGGAT TCATTGTCCG GGATCGGCTC GGGCAAAATC TGTTTGGCGA CAACACGTAT
CTCACGACCC TCAACGAGCC GTTCGCTGTC GCGGCGGGCG AAAGTTTTTC GGTCCGATTC
GGGTTCAGAA TGCCGGTCTT GCCGGTAGGC GATTATTCGG TGACGGTTGC AGTCGCCGAC
GGTTCACAAA GCGACCACGT GATCCACCAA TGGCTGCACG ATGCGGTGTT GTTGAAGTCG
CATTCGACGA GTGTCAGTAC AGGATTAATA GGTATTCCAA TGCATGAGAT CGTGCTTGAG
CGGGATACGC TGAACGAAGT TGGGGCGGCG CAATGA
 
Protein sequence
MPMSSELPAI SVQDVSKRFR VFAKPADRLK AAVRHRIGGL AKLVPARLLG TEGASEFHAL 
QHVSFHVQKG ETIGIIGRNG SGKSTLLQII CGTLTPSGGR VAINGRVAAL LELGAGFNPE
FTGRENVYMN AALLGLSKAQ IEERLDAIFA FADIGGFVDQ PVKTYSSGMY VRLAFAVIAH
VDADVLVIDE ALAVGDAFFT QKCMRFLRAF MERGTVLFVS HDTNAVVNLC TRVVWLDKGR
VREIGPAKDV CDSYLEAFYE EQHCASGRSV RALERSSVVR AIAEGDMRDQ RALLINASKL
RNDVELFQFT ADAKNFGLGG ASIEHVGIED GTGAPLNWVV GGEIVCIRIA VKALQNLERA
IVGFIVRDRL GQNLFGDNTY LTTLNEPFAV AAGESFSVRF GFRMPVLPVG DYSVTVAVAD
GSQSDHVIHQ WLHDAVLLKS HSTSVSTGLI GIPMHEIVLE RDTLNEVGAA Q