| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0867 |
|---|
| Symbol | |
|---|
| ID | 4680446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 862039 |
|---|
| End bp | 862986 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639845141 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_992207 |
|---|
| Protein GI | 121598439 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000394258 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCGC CTTCCCCGCC TCCGCTCGAC GCCCGCCTGT CCGTGCCCGC CGCCGATTTC
GTCGGCGGCG AAGTGCCGTT CGGCCTGCAA TCCGTCTGCC GGACGCTCGC CGAGGCGAAC
GCGAAGCTCG AGCGCTTCGC ATGGCTCGGC GATCATCTCG CGATCGCCGA ATGGACGCGC
GTCACCGACG AAAGCGAGAC GGTGTACGCG CAGCCCGGAC ATCACACGCT ATCGTGCTAC
CTGGACGGCG GCTACCGCAC CGAGCGGCAA AAAATCGCGC GCTACGGCGC GCCGAGCCTG
CTCTGCGCGC TGCCGGGCGA CCACGAATCG CGCTGGTGGG TGCGCGGCGA GATGCACTTC
GTGCACCTGT ACTTTCTGCC CGAGCACTTC GCGCGGCGCG CGGTGCGCGA GCTCGATCGC
GAGCCGCGCG AGCTGAAGCT CGCCGATCGC ACGTATTTCG AGGATGCGCG CGTCGCCGCG
CTATGCCGCT CGCTCGCGCT CGAGCGCTGG GACGACGCCG ATGGCCGGCT GCGCGTGAAC
GAAACCGCGC ACGAGGTGCT GAGCCTCCTG CTGCGCGGGC AGAGCATGAC GGGCGCCGGC
GCGCCGTTCA AGGGCGGCCT CGCGCCCGCC GTGCGCCGGC GCGTGCGCGA CTACATCGAC
ACGTACCTCG CGCAGCCGAT GACGCTCGGC GAGCTCGCGC AGATCGCGTC GCTGTCCGAA
TACCATTTCT CGAGGATGTT CAGCGTATCG TTCGGCCGCG CGCCGCACGC GTGGATCGCC
GAGCAGCGCC TCGCCCGCGC GCGCACGCTG CTGCGCACGA CATCGCTGCC GCTCGCGCAG
GTCGCCGCGC AATGCGGCTA CGCGAACGCC GTGCATCTCA GCCACCGCTT TCGCGACACG
CACGGCGCGA CGCCGGGCGC GTACCGCCGC GCGATGCAGG CCGCCTAG
|
|---|
| Protein sequence | MHAPSPPPLD ARLSVPAADF VGGEVPFGLQ SVCRTLAEAN AKLERFAWLG DHLAIAEWTR
VTDESETVYA QPGHHTLSCY LDGGYRTERQ KIARYGAPSL LCALPGDHES RWWVRGEMHF
VHLYFLPEHF ARRAVRELDR EPRELKLADR TYFEDARVAA LCRSLALERW DDADGRLRVN
ETAHEVLSLL LRGQSMTGAG APFKGGLAPA VRRRVRDYID TYLAQPMTLG ELAQIASLSE
YHFSRMFSVS FGRAPHAWIA EQRLARARTL LRTTSLPLAQ VAAQCGYANA VHLSHRFRDT
HGATPGAYRR AMQAA
|
|---|
| |