| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0777 |
|---|
| Symbol | |
|---|
| ID | 4679584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 785380 |
|---|
| End bp | 786321 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639845051 |
|---|
| Product | polar amino acid ABC transporter periplasmic amino acid-binding protein |
|---|
| Protein accession | YP_992122 |
|---|
| Protein GI | 121598329 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.277559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGTCAC GCGATACGCA TTTGCAGCGT GTCGAACGGC GCGCTCGCCG CGCGCCTGCC
GATCATGCGG CAGACGCGGC GAGCGCGGCG GACATGACGA AGCGGCCTCG AAATCGCCCG
CTCGGTTTTC CCCCACGGAG ATCAAAGATG AAGGCATTCA AACCGATGTT CACGTCAGCA
CTCGTCGCCG CGCTGCTCGG CGTCGCGGCC GCGTCCGCGC ACGCGGCCGA CCTGCTCGAC
AGCGTCAAGC AGGCCGGCGT GCTGAAGATC GCGCTCGAAG GCACCTACCC TCCGTTCGAC
TACCGCAACG GCGACGGCCA GCTCGAAGGC TTCGACGTCG CGAAGGAAGT CGCCGCCCGG
CTCGGCGTGA AGCCGCAATT CGTCACGACC GAGTGGAGCG GAATTCTCGC CGGCCTGCAG
GCGGGCAAGT TCGACGTGAT CGTCAACCAG GTCGGCATCA CGCCCGCGCG CCGGCAGGCG
CTCGACTTCA GCCAGCCGTA CGTGTACTCG GCCGCGCAGT TGATCCAGCG CGCCGACGAC
AAGCACGACT ACGGCGCGCC GGGCGCGCTG CAGGGCAAGC GCATCGGCGT CACGCTCGGC
ACCAACTTCG CCGATCTCGC GAAGACGCTG CAGGGCGTCG ACGTGAAGAC CTATCCGGGC
GCGCCGGAGA AACTGCGCGA CGTCGCCGCG GGCCGCATCG ACGTCAGCAT GGACGACCGG
CTGATGCTGC CGTACCTGAT CAAAAACGCG CACATGCCGC TGCGGCCCGG CGCGACGATC
AACGGCGGCG AGACGCAGAT GGGCATCCCG TTCCGCAAGG GCAACCCGAA GTTCGCGAAG
GCGCTCGACG ACGCGCTCGC GTCGATGCGC GCGGACGGCA CGCTCAAGAA GATCTCGGTG
CACTGGTTCG GCGTCGACAC GTCGGTCCCG AGCGCACAGT AA
|
|---|
| Protein sequence | MPSRDTHLQR VERRARRAPA DHAADAASAA DMTKRPRNRP LGFPPRRSKM KAFKPMFTSA
LVAALLGVAA ASAHAADLLD SVKQAGVLKI ALEGTYPPFD YRNGDGQLEG FDVAKEVAAR
LGVKPQFVTT EWSGILAGLQ AGKFDVIVNQ VGITPARRQA LDFSQPYVYS AAQLIQRADD
KHDYGAPGAL QGKRIGVTLG TNFADLAKTL QGVDVKTYPG APEKLRDVAA GRIDVSMDDR
LMLPYLIKNA HMPLRPGATI NGGETQMGIP FRKGNPKFAK ALDDALASMR ADGTLKKISV
HWFGVDTSVP SAQ
|
|---|
| |