Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A0123 |
Symbol | |
ID | 4679686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 127471 |
End bp | 128538 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639844401 |
Product | putative syringomycin synthesis regulator SyrP |
Protein accession | YP_991474 |
Protein GI | 121598389 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2175] Probable taurine catabolism dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.177421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGA TCCGGGATTC GATCACCTTC CAGAACGCGG CGGCGCTCAA GGCGCAGGCG CGGCTCGGCC CCGGCGTGAT CTGCGGCCTG CGCTCCGAGC GCGCGCCGCT GCCGCTCGTC GTCTCGCCGC ACGGCGACAG CGCGCTCGCC GCGGACCGCG ACGCGGCGCT CGCGTGGTTC GACGCGCGCC GCGCGGCATT CGACGCGCTG CTGCTCGAGC ACGGCGGCCT GCTGCTGCGC GGCTTCGCGG TGCCCGACAC GCATGCGTTT CGCGCGCTGA CCGACCGCTA TCCGCCGCAC GCGTTCGGCT ACATCGCCGG CGCGTCGCCG CGCAAGGCGA TCGACGGCAA CGTGTACGAA TCGACGCATC TGCCCGCGCC GTACAAGCTG AGCCTGCATC AGGAAAAGGC GTACATGTCG CACTATCCGC GGCTCATCGC GTTCTACTGC CGGCAGGCTG CGGCCGTCGG CGGCGAAACG CCGCTGTCGG ACATGCGCGC CGTCACGCGC CGCCTGCCCG CGCGCACGCT CGAGCGGTTC CGCGGCAAGG GCGTGATGTA CCGGCGCAAC TTCTCGGCGA AGCCGATGCC CGCGCACTTC AACCAGTTCT ACCGGCGCTG GCAGGACGCG TTCATGACCG ACGAGCGCGC CGAAGTCGAA TCGCTCTGCC GCGCGACGCA GCTCGAATAC GAGTGGCTGC CCGACGGCAG CCTCACGGTC ACGCACGTGG GCCCGGCGAC GGTCGTGCAT CCGCGCACGG GCGAGGAAGT GTGGTTCAAC CATGCGAGCA CGCAGCACAT CAACGCGCGC GTCGTGCACC CGACGATCCT GCGCGCGCTG CAGTCGTTCT ACAAGACGCG CGCCGCGCTG CCGTACGACA TCCGCTACGG CGACGGCACG CCGATGCCCG CCGAAGACCT CGATCCCGTC TACGACGCGA TCGACGCCGA GGAGACCGCG TTTCGCTGGC GCGAGCAGGA CGTGCTGCTG CTCGACAACA TCCTCGTCGC GCACGGACGC AACCCGTACA GCGGCCAGCG CGACATCCAG GTCGCGATGA TGGACTGA
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Protein sequence | MSEIRDSITF QNAAALKAQA RLGPGVICGL RSERAPLPLV VSPHGDSALA ADRDAALAWF DARRAAFDAL LLEHGGLLLR GFAVPDTHAF RALTDRYPPH AFGYIAGASP RKAIDGNVYE STHLPAPYKL SLHQEKAYMS HYPRLIAFYC RQAAAVGGET PLSDMRAVTR RLPARTLERF RGKGVMYRRN FSAKPMPAHF NQFYRRWQDA FMTDERAEVE SLCRATQLEY EWLPDGSLTV THVGPATVVH PRTGEEVWFN HASTQHINAR VVHPTILRAL QSFYKTRAAL PYDIRYGDGT PMPAEDLDPV YDAIDAEETA FRWREQDVLL LDNILVAHGR NPYSGQRDIQ VAMMD
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