Gene BMASAVP1_A0085 details

Gene Information

• Locus tag: BMASAVP1_A0085
• Symbol: lolB
• ID: 4681909
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 86526
• End bp: 87161
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639844363
• Product: outer membrane lipoprotein LolB
• Protein accession: YP_991437
• Protein GI: 121600809
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis
• TIGRFAM ID: [TIGR00548] outer membrane lipoprotein LolB

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACGACGA TGCCGCGTTT TGCCCAACCG CGCGCGCGCG GCGTCGCCCT CGTCGTGGCG 
GCCGCGGCCG CCGTCCTGCT CGGCGCCTGC GCGACGCAGC CGCCGCGCGC GCCCACCGCC 
GCGCCCGACG CCGCGCCCGA CGCGCGGCAG ACCGAGCAGA ATCGCGCGTA CACGGGCCGC 
TTCGCGGTTC AGTACCAAGA CCCGCTCGGC AATCCGCGCA ACGTCTACGG CAATTTCGAC 
TGGCAGGAGC AGGGCACGAA CGTGTCGCTC GAACTGCGCA GCCCGCTCGG CCAGACGCTT 
GCGATCGTGA AATCCGCGCC GGGCGGCGCG TCGCTCGAAC TGCCGAACCG TCAGCCGCAA 
TTCGCGCCGG ACGTCGGCGA ACTGATGCAG CGCGCGCTCG GCTTCGCGCT GCCGCTCGAC 
GGCCTGCGCT ACTGGCTGTT GCCGACGCCG TCGCCGACGA CGCCGGCGAC GACGGTGCGC 
GATCCGCAGG ACGGCGCGCG AATCAAGGAA ATCCGTCAGG ACGGCTGGAC CATCGATTAC 
GTCGCATACG CCGACGCGCC CGCCGCCGGC GTGAAGCGCA TCAATCTGGC GCGGCAGAAG 
CCGCCCCTCG ACATCAAGCT CGTGCTCGAC CGCTGA 

 

Protein sequence

MTTMPRFAQP RARGVALVVA AAAAVLLGAC ATQPPRAPTA APDAAPDARQ TEQNRAYTGR 
FAVQYQDPLG NPRNVYGNFD WQEQGTNVSL ELRSPLGQTL AIVKSAPGGA SLELPNRQPQ 
FAPDVGELMQ RALGFALPLD GLRYWLLPTP SPTTPATTVR DPQDGARIKE IRQDGWTIDY 
VAYADAPAAG VKRINLARQK PPLDIKLVLD R