| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0052 |
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| Symbol | |
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| ID | 4680300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 50935 |
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| End bp | 51867 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639844330 |
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| Product | ompA family protein |
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| Protein accession | YP_991404 |
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| Protein GI | 121600594 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.757478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGC CCCGCCTGCC CCTGCTGCGC GCCTGCCGCT TCGCGCTCGC GCTCGCCGCG
CTCGCGCTCG GCGGCGCCGC GCGCGCCGAC AACGTCGGCC CCGCCACCGT CACGCCGATC
GACGCAGGCG GCGTGCCCGT GAAATCGGTG CCGCTCGCCG CGCCCGTGAC GGCCGCGCCG
GTCGCCGCGA CGGCCGGCGC GGGCGCGACC GTGTCGTCGC CGCCGCCCGC GAACGCGACG
CCGGGCCAGG TCGTCGCCGG CGGCAAGGTC GCCGACGAAG CGACGAAGGC CGCCGTGCTG
CAGCGCCTGC GCGACACGTA CGGCGCCGCG AACGTCGTCG ACCAGATCGA AATCGGCAAC
GTCGCGACGC CGCCGAACTG GTCCGCGAAC GTCCAGAAGC TGATCGGCCC GCAACTGAAA
CAGATCAGCA AAGGACAGCT GAAGATCGAC GGCACGCAGA TCGACGTGAA GGGCGAAGTG
CACAACGAGG CGCAGCGCCA GCAGCTCGCG AGCGACATGG CGAACGCGCT GAATCCGACC
TACACGATCA AGAACGGGCT GCGCGTGAGC GCGTCCGAGC AGGGCCTGCT CGACCAGACG
CTCGCGAACC GCACGATCGA ATTCGAAACC GGCAGCGCGA CGCTCACGCC GCAAGGCCGC
GCGATTCTCG ACCAGATGGC GGGCGCGCTC GCGAAGATGT CGAGCCGAAC GGTCGAGATC
ATCGGGCACA CCGACAACTC GGGCAACCGC ACGTCGAACA TCGCGCTCAG CCAGGCGCGC
GCGGACGCGG TCAAGGGATA TCTGGTGACG AAGGGCATCG CGTCGCAGCA ACTGACGACG
ACGGGCGTCG GCCCCGATCA GCCGATCGCG CCGAACGATT CGGCCGACGG GCGCGCGCGC
AATCGCCGGA TCGAATTCCG CGCGGGACAG TAA
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| Protein sequence | MTKPRLPLLR ACRFALALAA LALGGAARAD NVGPATVTPI DAGGVPVKSV PLAAPVTAAP
VAATAGAGAT VSSPPPANAT PGQVVAGGKV ADEATKAAVL QRLRDTYGAA NVVDQIEIGN
VATPPNWSAN VQKLIGPQLK QISKGQLKID GTQIDVKGEV HNEAQRQQLA SDMANALNPT
YTIKNGLRVS ASEQGLLDQT LANRTIEFET GSATLTPQGR AILDQMAGAL AKMSSRTVEI
IGHTDNSGNR TSNIALSQAR ADAVKGYLVT KGIASQQLTT TGVGPDQPIA PNDSADGRAR
NRRIEFRAGQ
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