| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0046 |
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| Symbol | |
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| ID | 4679525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 42220 |
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| End bp | 43635 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639844324 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_991398 |
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| Protein GI | 121601056 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGCG CGCTCGCGCT CTTCGCATCG CAAGCGGTGC ACGCGCAATG GCTCGATCTC
TACGGAACCC GAAAGAATGT GTCGGCTTCT CCCGCCGCGC CGATGCTGAA GAACGCGACA
TGCCAGCCCG AGCTCGCGGA CCGTCCGATC GAGCTCGAAG ACGCGATCCT GCAGGCGATC
TGCGCGAACC CGCAGGCACG GCGCGCGTGG GCCGATGCGC GCGCGCAGGC CGCCCAGCTC
GGCGTGAAGG AGGCGGCGTA TCTGCCGACG CTCAATGCAA CAGCGGGCAT TCAGCGCAAC
TGGCAAACGA CGACGTACGA GCAGGACCTC GGCCCGATCA CGCTCACCGC CGACCAGAAG
CAGATCCAGA CGAGCCGCTA CGGCGCGTTG AACCTGAGCT GGGTGCTGTT CGATTTCGGC
AAGCGCAGCG CGGCGCTCAG GCAGGCGCGC GAGCTCCTCG CCGCCGCCAA CGCGACGCAG
GACGACACGC TCCAGACCCT CCTGTTCAAT GCCGCCCAGG CGTATTACAA CCTGCGCGAC
ACGCAGGCAG CGCTTGACGC GGCGCGCACG ACCGAACGCG TCGCGCAGGA TAGCCTCACC
GCGGCGAAGG CGAAGCACGA CGCCGGCGCC GGCACGCTGA GCGATCAACT GCAGGCGCAA
ACGAGCTATC GCCGCGCGGT GCTCGATCGC GTGAGCGCCG AAGGCGACGT GCGGAACGCG
ACGGGCGTGC TCGCCGTCGC GATGGGGCTC GACGCGAACA CGCCGCTGCG GATCGCGACC
GCCGAGCCGC CGGTCGATCG CAACGCGTTC GCCGAAGGCA TCGCGCAATT GATCGACGAG
GCGAAGCGGC AGCATCCGAA GCTCGTCGCC GCGCGCGCGA AACTCGACGC GGCGCGCGCG
AACGTCGATG CGGTGCGTGC GCAGGGCCGC CCGACCATCT CGCTGACCGG CAGCCTCAGC
CGCAACAGCC CGTCGTATCA GCAGCAGCCG GGCATCCAGA CCACCGCGAG CCACGGCAGC
ATGATCGGCG TGCAGGTGAC GATCCCGCTC TTCGAAGGCT TCGCGTCCGG CTACCGCGTC
GCGGCCGCGC AGGCGCAGGC GGATGCGCAG GAGGCCGACG TGCAGAACAC CGAGCTGAAC
GTCTCGCTCG ACGTGTGGAA GAGCTATCAG AGCCTGCAGA CCGACACCGC GAATCTCGAC
AATTCGAAGG ACCTGCTCGG CGATGCGCAA CGCTCGCTCG ACATCGCACG GGGCCGGTAC
AAGGCGGGCG TCGGCACGTT CACGGAGTTG CTCAATGCGC AGACCGCGCT CGCGGACGCG
CAGAAGCAGC GCGTGCAGGC GCTGTCGAAA TGGCGCACCG CGCGGCTCAA GCTCGCGGCG
AGCCTCGGCA GCATCGGCCT GTGGTCCGCC CATTGA
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| Protein sequence | MAGALALFAS QAVHAQWLDL YGTRKNVSAS PAAPMLKNAT CQPELADRPI ELEDAILQAI
CANPQARRAW ADARAQAAQL GVKEAAYLPT LNATAGIQRN WQTTTYEQDL GPITLTADQK
QIQTSRYGAL NLSWVLFDFG KRSAALRQAR ELLAAANATQ DDTLQTLLFN AAQAYYNLRD
TQAALDAART TERVAQDSLT AAKAKHDAGA GTLSDQLQAQ TSYRRAVLDR VSAEGDVRNA
TGVLAVAMGL DANTPLRIAT AEPPVDRNAF AEGIAQLIDE AKRQHPKLVA ARAKLDAARA
NVDAVRAQGR PTISLTGSLS RNSPSYQQQP GIQTTASHGS MIGVQVTIPL FEGFASGYRV
AAAQAQADAQ EADVQNTELN VSLDVWKSYQ SLQTDTANLD NSKDLLGDAQ RSLDIARGRY
KAGVGTFTEL LNAQTALADA QKQRVQALSK WRTARLKLAA SLGSIGLWSA H
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