| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1674 |
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| Symbol | |
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| ID | 4677888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 1643266 |
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| End bp | 1644501 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639844189 |
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| Product | putative outer membrane porin |
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| Protein accession | YP_991268 |
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| Protein GI | 121597035 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.264148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATTTCT TGCGTCTGGT GCAGTGCGCT ATTCTCCAAT CCGCAACAAA TAACGAATCA
CTCGCGTGGA GAAATAACTC GATGAAGAAA CTCGCTCTGT CTACCCTCTC GCTCGCGCTG
CTGGGCGCAG CCGGTGCAGC TCAGGCTCAA AGCAGCGTCA CGCTGTACGG CGTGATTGAT
ACGTCGATCA CTTATGTCCA CGGCAACGAC GGCAAGGCCA ACAACGCCTG GCTGATGGGC
AGCGGCAACC TGCAAGGCAG CCGCTGGGGC CTGAAGGGCA CCGAGGATCT CGGCGCCGGC
CTGAAGGCGA TCTTCCAGTT GGAAAATGGC TTCAACTCGA ACGACGGCAC GCTCGGCCAA
GGCAAGCGCA TGTTCGGCCG CCAGGCGTTC GTCGGTCTGC AGCATGACCA GTACGGCACG
CTGACGCTCG GCCGTCAGTA CGATCCGCTC GTCGACCTCG TGCAACCGGT GACGGCCGAC
AACTACTTCG GCAGCCTGTT CGCCACCCCG GGTGACGTCG ACAACAACGA CAACAGCCTG
CGCGTGAACA ACACGGTCAA GTACACGTCG CCCGTGTTCG CCGGCTTCCA GTTCGAAGCC
CTGTACGGCT TCAGCGGCAT CGCGGGCTCG CCGGGCCAAG GCCAGACGTG GTCGGCCGCC
GCCGCATACA ACAACGGCCC GATCGGCGTC GCGGCCGGCT ACTTCTACAC GTCGAACCCG
TCGCCGACGG CCGGCTCGCG CTCGACGTGG AGCGGCTCGT CCGACGCGAT CTTCGACGGC
GCGATCAACA GCGGCTACAC GAGCGCGAAG TCGATCGGCA TCGCACAGGT GGCCGGCCAG
TACGTGTTCG GCCCGGTCAC GGTCGGCCTC GGCTACAGCA ACGCGCAATA CAAGCCGGAC
GGCTTCTCGG GCTTCTCGTC GACCGAGAAG TACAACACGG GCCGCGGCTT CGTGAGGTAC
CAGGCCACGC CGGCGCTGCT GCTCGGCCTC GGCTACGCAT ACACGAAGGC GAGCGGCGAC
ACGGACGCGA AGTACCACCA AGTGTCGATC GGCGCGGACT ACGCGCTGTC CAAGCGCACG
GACGTCTACC TCGCCGGTGC GTACCAGCAC GCGAGCGGCA CGCAGCGCGT CGACGCGACG
ACGACGCAAA CGGCGCAGGC ATCGATCGGC TCGTACGGCG TGAACGGTAC GAAGTCGCAA
GAGATGGTGG CTCTGGGCCT GCGCCACAAG TTCTAA
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| Protein sequence | MDFLRLVQCA ILQSATNNES LAWRNNSMKK LALSTLSLAL LGAAGAAQAQ SSVTLYGVID
TSITYVHGND GKANNAWLMG SGNLQGSRWG LKGTEDLGAG LKAIFQLENG FNSNDGTLGQ
GKRMFGRQAF VGLQHDQYGT LTLGRQYDPL VDLVQPVTAD NYFGSLFATP GDVDNNDNSL
RVNNTVKYTS PVFAGFQFEA LYGFSGIAGS PGQGQTWSAA AAYNNGPIGV AAGYFYTSNP
SPTAGSRSTW SGSSDAIFDG AINSGYTSAK SIGIAQVAGQ YVFGPVTVGL GYSNAQYKPD
GFSGFSSTEK YNTGRGFVRY QATPALLLGL GYAYTKASGD TDAKYHQVSI GADYALSKRT
DVYLAGAYQH ASGTQRVDAT TTQTAQASIG SYGVNGTKSQ EMVALGLRHK F
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