| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1634 |
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| Symbol | |
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| ID | 4676850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 1600228 |
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| End bp | 1602951 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639844149 |
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| Product | 2-oxoacid dehydrogenase subunit E1 |
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| Protein accession | YP_991228 |
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| Protein GI | 121596676 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type
[TIGR03186] alpha-ketoglutarate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000003166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATT TATCGAACGG AATTCGCCCG GTCCTCGCCA CCGCGCGCCG CCACGACGAT
ACCGATCCGC AGGAAACCGC CGAATGGCTG GACGCGCTCG ACGGCGTCGT CGCGCACGCG
GGCGCCGAAC GCGCGCAGTA CCTGCTCGCG CAGCTCGCCG AGCACGCGGC GCGACGCCGG
CTCGCGCCGC CGCACGCGGG CGCGACGCCG TACGTGAACA CGATCCCCGT CGACGAGGAG
CCGCCTTACC CGGGCGACCT GCAGCTCGAG GAGCGCCTCG CGGCGGTGCT GCGCTGGAAC
GCGCTCGCGA TGGTGGTCCG CGCGAACCGC GCATACGGCG AGCTGGGCGG CCACATCGCG
AGCTACGCGT CGGCCGCCGA TCTGTTCGAA GTCGGCTTCA ACCATTTCTT CCGCGCGGCG
GGCGACGCGT CGGGCGGCGA TCTCGTCTAC TTCCAGCCGC ATTCGTCGCC GGGCGTCTAT
GCGCGCGCGT TCCTCGAAGG CTTCCTGAGC GACGCGCAGC TCGAGCACTA CCGGCGCGAG
ATCGCCGGGC CGGGCCTGTG CTCGTACCCG CATCCGTGGC TGATGCCCGA CTTCTGGCAA
TTTCCGACGG GCTCGATGGG CATCGGCCCG ATCAACGCGA TCTACCAGGC GCGCTTCATG
CGCTACCTGC AGAACCGCGG CCTGTTGCGC ACCGAGGGCC GCAAGGTGTG GGGCTTCTTC
GGCGACGGCG AGATGGACGA GCCCGAATCG ATCGGCGCGC TGTCGCTCGC CGCGCGCGAG
GGGCTCGACA ATCTCGTGTT CGTGATCAAC TGCAACCTGC AGCGCCTCGA CGGCCCGGTG
CGCGGCAACG GCCGCATCGT CGACGAGCTC GAATCGCAGT TCGCGGGCGC CGGCTGGAAC
GTGATCAAGG TGCTGTGGGG CTCGGACTGG GACGCGCTGT TCGCGCGCGA CGCGACGGGC
GCGCTCGCGC GCGCGTTCGC GCAAACGGTC GACGGCCAGT TCCAGACGTT CTCGGCGAAC
GACGGCGCGT ACAACCGCGC GCGCTTCTTC GGCCAGAACG ACGCGCTCGC GGCGCTCGTC
GCGCACCTGC GCGACGAGGA CATCGACCGG CTGCGCCGCG GCGGCCACGA CGCGCGCAAG
CTGTACGCCG CGTACGAGCG CGCGGTCCGG CACGAGGGCC GGCCGACGGT GATCCTCGCG
AAGACGATGA AGGGCTTCGG CCTGGGCGCG ATCGGCCAGG GCCGGATGAC GACCCACCAG
CAAAAGAAGC TCGACGTCGA GCACCTGCTC GCGTTCCGCG ACCGCTTCCG GCTGCCGCTC
ACCGACGAAG ACGTCGCGCA GCTGCGTTTC TACCGACCCG AGAAAGACAG CCCGGAGATG
CGATACCTGC ATGCGCGCCG GGCTGCCCTG GGAGGCTGTC TGCCCAGAAG GCGGGCAGCG
GCGACGGCGG CATTGACCGT GCCGTCGTTG CCGTCCTGGG GGCAATTCGC GCTCGACGGC
GGCCGCGAGA TGTCGACGAC GATGGCGATC GTGCGGATGC TCGGCGGTCT GCTGAAGGAT
GCGGCGCTCG GGCCGCGCAT CGTGCCCATC GTCGCCGACG AGGCGCGCAC GTTCGGGATG
GCGAACCTGT TCCGGCAGGT CGGCATCTAC TCGCCGCTCG GCCAGCGCTA CGAGCCCGAG
GATCTCGGCT CGATGCTCTA CTACCGCGAG GACACGCGCG GGCAGATTCT CGAGGAAGGG
ATCTCGGAAG CGGGCGCGAT ATCGTCGTGG ATCGCCGCGG CGACATCGTA CAGCGTGCAC
GATCTGCCGA TGCTGCCGTT CTACATCTAC TACTCGATGT TCGGCTTCCA GCGGATCGGC
GATCTGATCT GGGCCGCGGC CGACCAGCGC GCGCGCGGCT TCCTGATCGG CGCGACGTCG
GGCAAGACGA CGCTCGGCGG CGAAGGGCTC CAGCACCAGG ACGGCACGAG CCATCTCGCG
GCGTCGACGG TGCCGAACTG CCGCGCGTGG GATCCGGCGT TCGCCTACGA AATCGCGGTG
ATCGTCGACG AAGGAATGCG CGAGATGGTC GAGCGGCAGC GCGACACGTT CTACTACCTG
ACCGTCACGA ACGAGAATCA CGCGCAGCCG ACGCTGCCCG CGGACCGGCT CGACGCGGTG
CGCGGCGGCA TCCTGAAAGG CATGTATCCG CTCGATGCGG CCGCGCTGCC CGCCGCGCGC
GTGCAGTTGC TCGGCTCGGG CGCGATTCTC GGCGAAGTGC AGGCGGCCGC GCGCCTGCTG
CGCGACGATT GGCGAATCGA CGCGGCCGTC TGGAGCGTGA CGAGCTTCAC CGAGCTGCAA
CGCGACGGCA TCGCGGCCGA GCGCGCGCAG CGCCTCTTCG ATGCCGACGA CGCGAACGAA
CGCTCGCCGA CGCCCCACGT CACGTCCGCG CTCGCCGCGA CGCAAGGGCC CGTGATCGCC
GCGACCGACT ATGCGCGCGC GCTGCCCGAG CTGATCCGCG CGTACGTGCC GCGCCGCTAT
GTGACGCTCG GCACCGACGG CTTCGGCCGC AGCGACACGC GCGAAGCGCT GCGCGCGTTC
TTCGAGGTCG ATCGCGGCTC GATCGTGATC GCCGCGCTGC GCGCGCTCGC CGATGACGGG
GAGGTGACGC GCACCGTCGT GCGCGATGCG ATCGCGCGAT ACGGCAAGCG GGACGCGTCG
CGCACGCCGC CGTGGGAACG GTGA
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| Protein sequence | MNDLSNGIRP VLATARRHDD TDPQETAEWL DALDGVVAHA GAERAQYLLA QLAEHAARRR
LAPPHAGATP YVNTIPVDEE PPYPGDLQLE ERLAAVLRWN ALAMVVRANR AYGELGGHIA
SYASAADLFE VGFNHFFRAA GDASGGDLVY FQPHSSPGVY ARAFLEGFLS DAQLEHYRRE
IAGPGLCSYP HPWLMPDFWQ FPTGSMGIGP INAIYQARFM RYLQNRGLLR TEGRKVWGFF
GDGEMDEPES IGALSLAARE GLDNLVFVIN CNLQRLDGPV RGNGRIVDEL ESQFAGAGWN
VIKVLWGSDW DALFARDATG ALARAFAQTV DGQFQTFSAN DGAYNRARFF GQNDALAALV
AHLRDEDIDR LRRGGHDARK LYAAYERAVR HEGRPTVILA KTMKGFGLGA IGQGRMTTHQ
QKKLDVEHLL AFRDRFRLPL TDEDVAQLRF YRPEKDSPEM RYLHARRAAL GGCLPRRRAA
ATAALTVPSL PSWGQFALDG GREMSTTMAI VRMLGGLLKD AALGPRIVPI VADEARTFGM
ANLFRQVGIY SPLGQRYEPE DLGSMLYYRE DTRGQILEEG ISEAGAISSW IAAATSYSVH
DLPMLPFYIY YSMFGFQRIG DLIWAAADQR ARGFLIGATS GKTTLGGEGL QHQDGTSHLA
ASTVPNCRAW DPAFAYEIAV IVDEGMREMV ERQRDTFYYL TVTNENHAQP TLPADRLDAV
RGGILKGMYP LDAAALPAAR VQLLGSGAIL GEVQAAARLL RDDWRIDAAV WSVTSFTELQ
RDGIAAERAQ RLFDADDANE RSPTPHVTSA LAATQGPVIA ATDYARALPE LIRAYVPRRY
VTLGTDGFGR SDTREALRAF FEVDRGSIVI AALRALADDG EVTRTVVRDA IARYGKRDAS
RTPPWER
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