Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_1613 |
Symbol | |
ID | 4676992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | + |
Start bp | 1576980 |
End bp | 1578656 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639844128 |
Product | HlyB family hemolysin activator protein |
Protein accession | YP_991207 |
Protein GI | 121596989 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGCTTG CCATGACGGT GTTGCTGGCG GGCCGCTCGG CGCCGGCAAG CGCGTTCGGG CCGACGGTGC AGGACCGGGA GCGGGATCTG GGGGAGAAGG CGCGACGGCA GCAGATGATC GAACAGCATA GGCGGGGGCA TGCGGCCGAG CCGGCGGCCG GGTTGCCGGC GCCAGTGCAA GCACCCGAGT TGGGCGGTGC GCGTTTCCCG ATCACGCAAA TCGAAGTGCG GGGCGGGGCG CGCCATAGCC GGGAGATCGA CCGGATTGTC GAGCGCTACC GGGGCGCGAC CATGGGGCAG GCGGAGATTT TCGCGCTGTT GCGTGATCTG ATGAATTTCT ACTATGGCCG CGGTTATATC ACGACCGGCG TGTCGCTCGC CGAGCAAAAC CTGTCGAGCG GGAAGCTGAT CGTGGTGGTC CATTGGGGCT ACGTGAAGGG ATGGCGCGTG AACGGCAAGG CGCCGGAGGG CATGCGCGAG CGGTTGATGT TGAGCAGCGC GATGCCTGGC ATAGAAGGTT CCGTTTTGAA CATCCACGAT ATCGACCAGG CGATCGAGAA TCTGAACGGC TTGGGCAGAG CCGCCAAGAT CAACGTCGTC CCCGCCGAGG AAGCCGGGTA TTCCTATCTG GACGTCGTTT TGCAACGCTC GAAGCCGTTC GCGGTGTCGG CGTCGGTCGA TAACTCGGGT CTCGGCGATC GAGCGGGCGA CGGCTTATAC CGGTATGGCG TCGATATCGC GGTGGCGCAC CTGCTGGGCT GGAACGACGT GCTGACGCTC TCGGCCGGCC GTCGCTACTA CCAGGACCCC GCCCATCATG CCTACGATTC GCTGGCCGTG TCATACGGAT GGCGCGTGGG CCGCTGGAGC GCCGATCTGC GGTATATCGC GCAGCCGACC AAGAGCCTCC TTTCCGGAAC CTATGGTGAC TACCAACTGA GCGGCAATAC GCAGGATGTC AACCTGCGCG TGTCGCGCGT GCTTCGGCGC TGGCGGACCG GCACGGATGC CGTCTACGTT GCGATCGACC GCAAGCGCGT GCGCAACTAT ATCGACGACA CGCTGATCGA GATCAACAGC AACACCCATA CGAGCGTCAC GGCGGGAGTC AATCGGCTGG ACAGTCTGTT CGGCGGAGTC GTATTCGCGG ATGGGGGCTG GACGAGGGGC GTGGGCTGGC TGGGGGCGAG CGAGGACCCT GTGTCCGCCG GGCAAGGGCC GCTGTCGCGT TACGACAAAT TCAATCTGAA CCTGAACTGG TCGCGCGACT TCACGGCGGG CTCGTTGCGA GCCCGTTACA CGGCGGCGAT GGGGGCGCAG TATTCGAAGG ATGACCTGTA CTACGACAGC AAGTTCGTCA TTGGCGACCA GTACACGGTG CGCGGCTTCA AGATCCGGTC TGCCTATGGG GATAGCGGCG TGTCTGTATC GAACACGCTG AGCTTTCCGT TTCCGACGTC GATCGGAACG GTCACACCGT TGGTCGGTGT GGATTGGGGT GCCGTCGGGA ACAACGGCGA AGCGGACAAT GGCGGCTGGA TCGGCGCAGT TGCGGGCGGG CTCCGGGTGT CGACGAAATG GGCCAATGCG GCGGTGACCA TCGGCAAGCC GTTCAGGGCG CTGCCGGGCA TGGGGTACGG GGTGGTCTGG TATTTGAGCG CATCAGCCAC GTATTAG
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Protein sequence | MTLAMTVLLA GRSAPASAFG PTVQDRERDL GEKARRQQMI EQHRRGHAAE PAAGLPAPVQ APELGGARFP ITQIEVRGGA RHSREIDRIV ERYRGATMGQ AEIFALLRDL MNFYYGRGYI TTGVSLAEQN LSSGKLIVVV HWGYVKGWRV NGKAPEGMRE RLMLSSAMPG IEGSVLNIHD IDQAIENLNG LGRAAKINVV PAEEAGYSYL DVVLQRSKPF AVSASVDNSG LGDRAGDGLY RYGVDIAVAH LLGWNDVLTL SAGRRYYQDP AHHAYDSLAV SYGWRVGRWS ADLRYIAQPT KSLLSGTYGD YQLSGNTQDV NLRVSRVLRR WRTGTDAVYV AIDRKRVRNY IDDTLIEINS NTHTSVTAGV NRLDSLFGGV VFADGGWTRG VGWLGASEDP VSAGQGPLSR YDKFNLNLNW SRDFTAGSLR ARYTAAMGAQ YSKDDLYYDS KFVIGDQYTV RGFKIRSAYG DSGVSVSNTL SFPFPTSIGT VTPLVGVDWG AVGNNGEADN GGWIGAVAGG LRVSTKWANA AVTIGKPFRA LPGMGYGVVW YLSASATY
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