| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1592 |
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| Symbol | |
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| ID | 4676993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 1552288 |
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| End bp | 1553604 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639844107 |
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| Product | hypothetical protein |
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| Protein accession | YP_991186 |
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| Protein GI | 121596826 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTT CTTCCGATTC GTTCTCGGCC GGCTCGGGCG GATTCGTGCC GCCGAATCCG
GGCGGCGCGC ACCCGGCCGC CGCGCCGGCG GCGGGTGCGG CCGCGTTTCA GCCGAGGCCG
GGCCGCTGGG CGGCGAGCGG CACGAATCCG CTCGTCGCGG CCGCGAACCC GCTGTTGAAC
CTCGTGCCGC AGATCCGTTC GACCGTCCAT CATCCGAATC CCGCGTGGCT GCGCGAGCAT
CTCGTCGTCG AGATCCGCCA GTTCGAGGAG CGCGCGCAGC AGGCGGGCGT CGCCTCCGAG
GCGATCATCG GCGCGCGCTA CTGCCTGTGC ACCGCGCTCG ACGAGGCCGC CGCGCTGACG
CCGTGGGGCG GCAGCGTATG GTCGTCGCAT AGCCTGCTCG TGTCGTTCCA CAACGAGACG
TGGGGCGGCG AGAAGTTCTT CCATCTGCTC GAGCGGCTGT CGCAGCAGCC GCGCCAGCAT
CTCGACCTGC TCGAGCTGCT GTACTTCTGC CTCGCGCTCG GCTTCGAGGG GCGCTACCGC
GTGCTCGACA ACGGCCGCGC GCAGCTCGAC GCGGTGCGCC GCCAGCTCGC GCAGACGATC
CGCTCGGTGC GCGGCGAATT CGATCCGGCG CTCTCGCCGC ATTGGCGCGA CGTCGTCACG
CGCGACGTCA CGCGGCGCTT CACGGTGCCG CTGTGGGTGT GCGTCGCGCT TGCGCTGCTC
GTGGGCTTCG GCGTGTTCGC GGGGCTGCGC ATCGCGCTCG CCGGCCATTC GGATCGGCTG
TTCGCGTCGA TCGACGCGCT GCACGTGCCG AAGCTGCAGC CGGCGCCGCC CGCGCCGCAT
CCGGCGCCCG CGCCGCGCGT CGCGAAGTTC CTCGAGCCGG AGATCGCCGC GGGGCTCGTG
AGCGTGCGCG ACGAGGCCGA CCGCAGCGTG ATCGTGCTGC GCGGCGACGG CCTGTTCGGC
TCCGGCTCGA CGTCGGTGAT CGATCGCTAC ATGCCGGTGC TCACGCGCGT GGCCGACGCG
CTGAACCAGG TGCAGGGCAA CGTGCGCGTG AGCGGCTACA CCGACGACAC GCCGGTGCAC
ACCGCGCGCT TCGCGTCGAA CTGGGATTTG TCGCGCGAGC GCGCGCAGGC GGTCCGCAGC
CTGATCGCCG CGCGGCTCGA CCGCCCCGAG CGGATCACCG CCGAAGGGCG CGGCACGCTC
GATCCCGTCG CGCCGAACGA TTCGCCCGCG AACCGCGCGC GCAACCGGCG CGTCGAGATC
ACGCTGATGC TCGCGCCCGG CAGCGACGCC GCGCGCGCGA CGAAGGAGGC GCCCTGA
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| Protein sequence | MNTSSDSFSA GSGGFVPPNP GGAHPAAAPA AGAAAFQPRP GRWAASGTNP LVAAANPLLN
LVPQIRSTVH HPNPAWLREH LVVEIRQFEE RAQQAGVASE AIIGARYCLC TALDEAAALT
PWGGSVWSSH SLLVSFHNET WGGEKFFHLL ERLSQQPRQH LDLLELLYFC LALGFEGRYR
VLDNGRAQLD AVRRQLAQTI RSVRGEFDPA LSPHWRDVVT RDVTRRFTVP LWVCVALALL
VGFGVFAGLR IALAGHSDRL FASIDALHVP KLQPAPPAPH PAPAPRVAKF LEPEIAAGLV
SVRDEADRSV IVLRGDGLFG SGSTSVIDRY MPVLTRVADA LNQVQGNVRV SGYTDDTPVH
TARFASNWDL SRERAQAVRS LIAARLDRPE RITAEGRGTL DPVAPNDSPA NRARNRRVEI
TLMLAPGSDA ARATKEAP
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