| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1500 |
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| Symbol | polA |
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| ID | 4677282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 1468836 |
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| End bp | 1471616 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639844015 |
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| Product | DNA polymerase I |
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| Protein accession | YP_991095 |
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| Protein GI | 121597404 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.530484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAG AACGAAATCT GGAAGGTAAG ACCCTGCTAT TGGTTGACGG TTCGAGCTAT
CTGTATCGGG CTTACCATGC GATGCCTGAT TTGCGCGGCC CTGGCGGGGA GCCGACCGGA
GCGCTCTACG GAATCGTCAA TATGTTGCGC CGCATGCGCA AGGATGTCAG TGCAGAGTAT
AGCGCGTGCG TGTTCGACGC CAAGGGCAAA ACCTTCCGCG ACGATCTGTA TGCCGACTAC
AAGGCGCACC GCCCGCCGAT GCCGCCCGAT CTCGCGCTGC AGATCGAGCC GATCCATACG
GCCGTGCGCG CGCTCGGCTG GCCGCTGTTG ATGATCGAGG GCGTCGAGGC CGACGACGTG
ATCGGCACGC TTGCGAAGCA GGCCGAACAA CACGGCATGA ACGTGATCGT CTCGACGGGC
GACAAGGATC TCGCGCAACT CGTCACCGAT CGCGTCACGC TCATCAACAC GATGACGAAC
GAGGCGCTCG ACCGCGACGG CGTGCTCGCG AAGTTCGGCG TGCCGCCGGA GCGGATCGTC
GATTACCTGT CGCTCATCGG CGACACCGTC GACAACGTGC CGGGCGTCGA GAAGTGCGGG
CCGAAGACGG CCGTCAAGTG GCTCACGCAG TACGGCTCGC TCGACGGCGT CGTCGAACAT
GCGGGCGAGA TCAAGGGCGG CGTCGGCGAC AACCTGCGCC GTGCGCTCGA TTTCCTGCCG
CTCGCGCGCA AGCTGGTGAC GGTCGAGACC GGCTGCGAGC TCGCGCCGCA CGTCGAATCG
TTCGACGCGT CGCTCGCGAC GGACGGCGAG GGCCGCGACG CGCTGCGCGA GATCTTCGCG
AAGTACGGCT TCAAGACGTG GCTGCGCGAG CTCGACAGCG AACCCGCCGC CGCGGCCGGT
GCGGCCGGTG CGGCCGCCGC CGGCGCCGCG CCGGATCCGG CGAGCGGCGC GACGGCCGAA
CTGCCGCTCG CCACGGCGCG CAACTACGCG ACCGTGCAGA CGTGGGAGCA GTTCGACGCG
TGGCTCGCGA AGATCTCCGC CGCAGAGCTG ACCGCGTTCG ACACCGAGAC GACGTCGCTC
GACCCGATGC GCGCAGAGAT CGTCGGCCTG TCGTTCTCGG TGGAGCCGGG CCATGCCGCG
TACGTGCCGG TTGCGCACCG CGGGCCGGAC ATGCCCGCGC AACTGCCGCG CGACGAAGTG
CTCGCGAAGC TCACGCCGTG GCTCGAGGAT GCGGGCAAGA AGAAGCTCGG CCAACACCTG
AAGTACGACG CGCAGGTGCT CGCGAACTAC GGCATCGCGC TGAACGGCAT CGAGCACGAC
ACGCTGCTCG AATCGTATGT GCTCGAATCG CACCGCACGC ACGACATGGA CAGCCTCGCG
CTGCGCCATC TCGGCGTGAA GACGATCAAG TACGAGGACG TGGCGGGCAA GGGCGCGCAG
CAGATCGGCT TCGACGAGGT GCCGCTCGCG CAGGCGTCCG AGTATGCGGC GGAAGACGCC
GACATCACGC TGCAGCTGCA TCACGCGCTG TATCCGCAGA TCGCGCGCGA GCCGGGCCTC
ACGCGCGTGT ATCGCGACAT CGAGCTGCCG GTGTCGCTCG TGTTGCGCAA GATGGAGCGC
ACCGGCGTGC TGATCGACGG CGACAGGCTG AGCCGCCAGA GCGGCGAGAT CGCGACGCGG
CTCGTCGCGC TCGAGCAGGA GGCGTACGCG CTCGCGGGCG GCGAATTCAA TCTCGGCTCG
CCGAAGCAGA TCGGCCAGAT TTTCTTCGAG CGGCTGCAAT TGCCCGTCGT CAAGAAGACG
CCGAGCGGCG CGCCGTCGAC CGACGAGGAG GTGCTGCAAA AGCTCGCCGA GGACTATCCG
CTGCCGAAGC TGTTGCTTGA GCACCGCGGC CTGTCGAAGC TGAAATCGAC CTATACCGAC
AAGCTGCCGC GCATGGTCAA TCCGGACACG GGCCGCGTGC ACACGAACTA TGCGCAGGCG
GTGGCGGTCA CCGGGCGGCT CGCGTCGAAC GATCCGAACC TGCAGAACAT CCCGGTGCGC
ACGACCGAAG GGCGGCGCAT CCGCGAGGCG TTCGTCGCGC CGCCGGGCAG CAAGATCGTG
TCCGCCGACT ACTCGCAAAT CGAGCTGCGC ATCATGGCGC ACATCTCGGA GGACGAATCG
TTGCTGCGCG CGTTCGCGCA CGGCGAGGAC ATTCACCGCG CGACCGCGGC GGAGGTGTTC
GGCGTGACGC CGCTCGAAGT GACGTCCGAT CAGCGGCGCA TCGCGAAGGT GATCAACTTC
GGTCTGATCT ATGGGATGAG TTCGTTCGGC CTCGCGTCGA ATCTCGGCAT CACGCGCGAT
GCGGCGAAGC TCTATATCGA CCGCTACTTC CTCCGCTATC CGGGCGTCGC CCGCTACATG
GAGGAAACGC GCATGCGGGC GAAGGAGAAG GGCTACGTCG AAACCGTGTT CGGCCGCCGC
CTGTGGCTGC CCGAGATCAA CGGCGGCAAC GGGCCGCGCC GCCAGGCCGC CGAGCGCGCG
GCGATCAACG CGCCGATGCA GGGCACGGCC GCCGATCTGA TCAAGCTGTC GATGATCGCG
GTCGACGACT GGCTCGAGCG CGGCGGCTTG CGCGCGCGAA TGATCATGCA GGTGCACGAC
GAACTCGTGC TCGAGGTGCC GGAGGACGAG CTGTCCATCG TGCGCGAGAA GCTGCCGGAG
ATGATGTGCG GCGTCGCGAA ACTGAAGGTG CCGCTCGTCG CCGAGGTCGG CGTCGGCGAG
AACTGGGAAG AGGCGCACTG A
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| Protein sequence | MPEERNLEGK TLLLVDGSSY LYRAYHAMPD LRGPGGEPTG ALYGIVNMLR RMRKDVSAEY
SACVFDAKGK TFRDDLYADY KAHRPPMPPD LALQIEPIHT AVRALGWPLL MIEGVEADDV
IGTLAKQAEQ HGMNVIVSTG DKDLAQLVTD RVTLINTMTN EALDRDGVLA KFGVPPERIV
DYLSLIGDTV DNVPGVEKCG PKTAVKWLTQ YGSLDGVVEH AGEIKGGVGD NLRRALDFLP
LARKLVTVET GCELAPHVES FDASLATDGE GRDALREIFA KYGFKTWLRE LDSEPAAAAG
AAGAAAAGAA PDPASGATAE LPLATARNYA TVQTWEQFDA WLAKISAAEL TAFDTETTSL
DPMRAEIVGL SFSVEPGHAA YVPVAHRGPD MPAQLPRDEV LAKLTPWLED AGKKKLGQHL
KYDAQVLANY GIALNGIEHD TLLESYVLES HRTHDMDSLA LRHLGVKTIK YEDVAGKGAQ
QIGFDEVPLA QASEYAAEDA DITLQLHHAL YPQIAREPGL TRVYRDIELP VSLVLRKMER
TGVLIDGDRL SRQSGEIATR LVALEQEAYA LAGGEFNLGS PKQIGQIFFE RLQLPVVKKT
PSGAPSTDEE VLQKLAEDYP LPKLLLEHRG LSKLKSTYTD KLPRMVNPDT GRVHTNYAQA
VAVTGRLASN DPNLQNIPVR TTEGRRIREA FVAPPGSKIV SADYSQIELR IMAHISEDES
LLRAFAHGED IHRATAAEVF GVTPLEVTSD QRRIAKVINF GLIYGMSSFG LASNLGITRD
AAKLYIDRYF LRYPGVARYM EETRMRAKEK GYVETVFGRR LWLPEINGGN GPRRQAAERA
AINAPMQGTA ADLIKLSMIA VDDWLERGGL RARMIMQVHD ELVLEVPEDE LSIVREKLPE
MMCGVAKLKV PLVAEVGVGE NWEEAH
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