| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1413 |
|---|
| Symbol | trpS-2 |
|---|
| ID | 4676827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 1392772 |
|---|
| End bp | 1393812 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639843929 |
|---|
| Product | tryptophanyl-tRNA synthetase II |
|---|
| Protein accession | YP_991009 |
|---|
| Protein GI | 121597311 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.718903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACG ACACCTCGAA TCCTTGCCGA GCGCCGATCG CACTGACCGG CGACCGCCCG
ACGGGCGCGC TGCACCTCGG CCATTACATC GGCTCGCTGA AGACGCGCAT CGCGCTTCAG
GACACGCACC GGCAATTCAT CCTCGTCGCC GACACGCAGG CGCTGACCGA CAACGCGCAC
GATCCCGACA AGGTTCGCCG CAACGTGATC GAAGTCGCGC TCGACTATCT GGCCGTCGGC
ATCGATCCGC GCCGGAGCAC GATCGCCGTG CAGTCGGGCC TGCCCGCGCT CGCCGAGCTG
ACGCTCTTCT ATCTGAACTT CGTCACCGTC GCGCGCCTCG AGCGCAATCC GACGATCAAG
GACGAGATCC ACGCGCGCGG CTTCGGCCGC GACATTCCCG CCGGCTTTCT CTGCTACCCG
GTCGCGCAGG CGGCCGACAT CACCGCGTTC AAGGCCGACA CGGTGCCCGT CGGCGACGAT
CAACTGCCGC TCATCGAGCA GACGAACGAG ATCGTCCGTC GCGTCAACCG GCAGGCGGGC
GCCGACGTGC TGCCCGAGGC GAGCGCGCTG ATCTCGCCGA CGGGACGGCT GCCGGGCGTC
GACGGCAAGG CGAAGATGAG CAAATCGCAA GGCAACGCGA TCGCGCTGTC GTCGTCGCCC
GATGCGATCG CCGACGCGGT CAGGCGGATG TACACCGATC CGAACCACTT GCGCGTGTCC
GATCCGGGAA CGGTCGAAGG CAACGTGGTG TTCACGTATC TCGACGCGTT CGACGGCGAG
CCCGACGAGC TCGAGCGGCT GAAGGCCGCG TATCGCGCGG GCGGCCTCGG CGACATGGTG
CTCAAGCGCC GGCTCGAGGA CAGGCTGCAG GCGTTGATCG CGCCGATCCG CGAGCGGCGC
GCGCAGCTCG CGCGCGATCC GGGCTACGTC GTCGACGTGC TGAAGGACGG CACCGCGCAC
GCACGCGACG TCACGCAGCG CACGCTCGAC GAGGTGCGCG ATGCGCTGGG CGCGTTTTCG
TTCCGGCGGT TCGTCGGTTG A
|
|---|
| Protein sequence | MHDDTSNPCR APIALTGDRP TGALHLGHYI GSLKTRIALQ DTHRQFILVA DTQALTDNAH
DPDKVRRNVI EVALDYLAVG IDPRRSTIAV QSGLPALAEL TLFYLNFVTV ARLERNPTIK
DEIHARGFGR DIPAGFLCYP VAQAADITAF KADTVPVGDD QLPLIEQTNE IVRRVNRQAG
ADVLPEASAL ISPTGRLPGV DGKAKMSKSQ GNAIALSSSP DAIADAVRRM YTDPNHLRVS
DPGTVEGNVV FTYLDAFDGE PDELERLKAA YRAGGLGDMV LKRRLEDRLQ ALIAPIRERR
AQLARDPGYV VDVLKDGTAH ARDVTQRTLD EVRDALGAFS FRRFVG
|
|---|
| |