Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0843 |
Symbol | |
ID | 4677667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 850061 |
End bp | 851611 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639843363 |
Product | squalene/phytoene synthase family protein |
Protein accession | YP_990443 |
Protein GI | 121596813 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.336434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGCGCCG TGCGGTGCGC GCGCCGTTTA CTTCGCGGTT TCGTCGAGGC CGCGTTGCAA CAGTTCGGTC AACAATCCGG TCATCCCGTC CGGATGCGCG GCCGCCCGCT CGTTCAGGCG CGCGACGAGC TCGATGTTCA GCTTGCACGC GAACGGCACG AGGCCCTGCG CCTGTTCGAG CCTGCGCCGC TCGCGGCGAT CGGCCGCCGC ATCTTCGGCG CCCTTGCCGA AGCGCGCGGA TGTCGTCTGC TTCATCGCGT GCGTCAGCTT CAACGCCTTG TTCTTCTCGA GATCGGTTTT CTTCATCGCC ATCGCGGTCA CCTCTTGCAG GAAAGGATGC GATTGTACGC ATTGCCGCGC GGCGCGGATA TCGGCCGCCG CGCGCCGTGC GGCGCGCCCG GTCGCACCCT GCGCGGCCGG CCGTGCGCGA AGCGCCGGCG GCCCGCGCGC ATTTGCCGAT ACAATGCGGC AGCCATTCGT ATGACCGACC TGATCCGATC CATGGGCAAT TCCACCCGGG CCTTTCTGCT GGGCCCCCTG CTGAAGGGCG TGTCGCGCTC CTTCTATCTG ACGTTGCGCG TGCTGCCGCA AGGCATGCGC GACCCGATCG GCCTTGCGTA TCTGCTCGCG CGCGCGGCCG ACACGATCGC CGACACGTCG CTGATCCCGC CCGCTCAGCG GCTCGAACTG CTGCTGTCGC TGCGCGCGCA GATCAACGGC GCGCCCGATC CGCACGCGCT CGCGCGGATC GCGGGCGAGG TCGCGGGGCA GCAGGCGCAG ACGGACGAGA AGACGCTGCT CGAATCGCTT GGCCCCGCGC TCGCGGTGCT GTCGCAATTG AGCGCGCCCG ATCGCGCCGC GGTGCGCGGC GTCGTCACCA CGCTCACCGA AGGGATGGAA TTCGATTTGC GCACGTTCCC GGACGAATCG TCGGGCCGCA TCGTCGCGCT GCGGGAATGG CCGGCGCTCG ATCGCTATAC GTATCTCGTT GCCGGCTGCG TCGGCGAATT CTGGACGAAG ATGACGTGCG CGCATCTGCC CGGGCTGCTG ACCGAGCGGG AGGACACGAT GAGCGAGCGC GGCATCCGCT TCGGCAAGGC GCTGCAGATG ACCAACGTGC TGCGCGACTG CGGCAGGGAC CTGCGGATCG GCCGCTGCTA TCTGCCGCAG GCGATGCTGG ACGAATACGG GCTGCGCGCG GAGGATCTGC TGGGGCCGGA CGCTTCGCTG CGCGTACGGC CGCTGATGCA TGCGCTCGTG CGCACGACGC TCGCGCATTT TCGCGCGGGC ATCGATTATA CGTTCGCGAT TCCGCGCCGC GCGCCGCGCC TGCGGCTTGC CTGTTTCTGG CCGATCGCGA TCGGCCTGCG GACGCTCGCG CTGCTCGCGT CGAACGACGC GTGGCTCGAT CCGGCGCGCG CGTCGAAGGT GCGGCGCGGC GACGTCTACC GGATCCTCGC GTATTCGCTG CCGCTCGCGA TGTCGAACGG CGCGCTGCGC GCGTGGCTCG ACCGCCTGAT CGCGGACGTC GAGGCGCGGC TCATCGCGTG A
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Protein sequence | MCAVRCARRL LRGFVEAALQ QFGQQSGHPV RMRGRPLVQA RDELDVQLAR ERHEALRLFE PAPLAAIGRR IFGALAEARG CRLLHRVRQL QRLVLLEIGF LHRHRGHLLQ ERMRLYALPR GADIGRRAPC GAPGRTLRGR PCAKRRRPAR ICRYNAAAIR MTDLIRSMGN STRAFLLGPL LKGVSRSFYL TLRVLPQGMR DPIGLAYLLA RAADTIADTS LIPPAQRLEL LLSLRAQING APDPHALARI AGEVAGQQAQ TDEKTLLESL GPALAVLSQL SAPDRAAVRG VVTTLTEGME FDLRTFPDES SGRIVALREW PALDRYTYLV AGCVGEFWTK MTCAHLPGLL TEREDTMSER GIRFGKALQM TNVLRDCGRD LRIGRCYLPQ AMLDEYGLRA EDLLGPDASL RVRPLMHALV RTTLAHFRAG IDYTFAIPRR APRLRLACFW PIAIGLRTLA LLASNDAWLD PARASKVRRG DVYRILAYSL PLAMSNGALR AWLDRLIADV EARLIA
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