Gene BMASAVP1_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_0676 
SymbolprfA 
ID4677048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand
Start bp680739 
End bp681821 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content67% 
IMG OID639843201 
Productpeptide chain release factor 1 
Protein accessionYP_990282 
Protein GI121597849 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACGA GCATGCAAAG CAAGCTCGAC CAGCTCACAA CCCGGCTGGC CGAACTGAAC 
GACCTGTTGA GCCGCGAGAA CGTCACCGCG GACCTCGACC AGTATCGCAA GCTGACGCGC
GAGCACGCGG AGATCGGCCC CGTCGTCGAG CACTACGCGC AGTGGCGCCA GGCGCGCGCC
GACGAACTCG CCGCGCAGGA ACTGCTCGCC GACGCCTCGA TGCGCGATTT CGCCGAGGAC
GAGCTGCGCG GCGCGCGCGA CCGGATGGGC CGCCTCGCGG CCGAGCTGCA GACGATGCTG
CTGCCGAAGG ACCCGAACGA CGAGCGCAAC ATCTTCGTCG AAATCCGCGC GGGCACGGGC
GGCGACGAAT CGGCACTGTT CGCGGGCAAC CTGCTGCGGA TGTACCTGCG CTACGCGGAG
CGGCAGCGCT GGCAGGTCGA GATGATGTCG GAGAGCCCGT CGGATCTCGG CGGCTACAAG
GAAGTGATCG TGCGGATCGC GGGCTACGGC GCGTACTCGC GCCTGAAGTT CGAATCGGGC
GGCCACCGCG TGCAGCGCGT GCCCGCGACC GAGACGCAGG GCCGCATCCA TACGTCCGCG
TGCACGGTTG CGGTGATGCC CGAGGCCGAC GAGATCGGCG AAGTCGAGAT CAATCCGGCC
GATTTGCGGA TCGACACGTT CCGCGCGTCG GGCGCGGGCG GCCAGCACAT CAACAAGACC
GATTCGGCGG TGCGCGTCAC GCACATCCCG ACGGGAATCG TCGTCGAGTG CCAGGACGAC
CGCTCGCAGC ACAAGAACAA GGATCGCGCG CTGAAGGTGC TCGCCGCGCG GATCAAGGAC
AAGCAGTATC ACGAGCAGCA CGCGAAGGAG GCAGCCACGC GCAAGAGCCT GATCGGCTCG
GGCGACCGCT CCGAGCGGAT CCGCACGTAC AACTTCCCGC AGGGCCGGAT GACCGATCAC
CGGATCAACC TGACGCTGTA CAAGCTCGAG CAGATCATGG ACGGCGATCT CGACGAGCTG
ATCGCCGCGC TCGTGAGCGA GCACCAGGCC GAGCTGCTCG CCTCGCTCGG CGACGCCGAA
TGA
 
Protein sequence
MKTSMQSKLD QLTTRLAELN DLLSRENVTA DLDQYRKLTR EHAEIGPVVE HYAQWRQARA 
DELAAQELLA DASMRDFAED ELRGARDRMG RLAAELQTML LPKDPNDERN IFVEIRAGTG
GDESALFAGN LLRMYLRYAE RQRWQVEMMS ESPSDLGGYK EVIVRIAGYG AYSRLKFESG
GHRVQRVPAT ETQGRIHTSA CTVAVMPEAD EIGEVEINPA DLRIDTFRAS GAGGQHINKT
DSAVRVTHIP TGIVVECQDD RSQHKNKDRA LKVLAARIKD KQYHEQHAKE AATRKSLIGS
GDRSERIRTY NFPQGRMTDH RINLTLYKLE QIMDGDLDEL IAALVSEHQA ELLASLGDAE