Gene BMASAVP1_0657 details

Gene Information

• Locus tag: BMASAVP1_0657
• Symbol: ychF
• ID: 4677433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 665877
• End bp: 666971
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639843182
• Product: GTP-dependent nucleic acid-binding protein EngD
• Protein accession: YP_990263
• Protein GI: 121598050
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0012] Predicted GTPase, probable translation factor
• TIGRFAM ID: [TIGR00092] GTP-binding protein YchF

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTCA AATGCGGCAT CGTCGGCTTG CCCAACGTCG GCAAGTCCAC CCTGTTCAAC 
GCGCTGACGA AGGCCGGCAT CGCCGCCGAG AACTATCCGT TCTGCACGAT CGAGCCGAAC 
GTCGGCGTCG TCGAGGTGCC TGACGCACGC CTGAAGGCGC TCGCCGAAAT CATCAAGCCC 
GAGCGCGTCG TGCCGGCCGT CGTCGAATTC GTCGACATCG CGGGCCTCGT CGCCGGCGCG 
AGCAAGGGCG AGGGCCTCGG CAACCAGTTC CTCGCGAACA TCCGCGAAAC CGATGCGATC 
ACGCACGTCG TGCGCTGCTT CGAGGACGAG AACGTCATCC ACGTCGCCGG CAAGGTGAGC 
CCGCTCGACG ACATCGAAGT CATCAACACC GAGCTCGCGC TCGCCGACCT CGGCACCGTC 
GAGAAGGCGC TCGCCCGCTA TTCGAAGGCG GCGAAATCGG GCAACGACAA GGAAGCGGCG 
AAGCTCGTCG CGGTGCTCGA CAAGGCGCGC GCGCACCTCG ATCAGGGCAA GGCCGTGCGC 
GGGCTCGATC TGTCCGACGA CGAGAGGGCG CTCCTCAAGC CGTTCTGCCT GATCACCGCG 
AAGCCGGCGA TGTACGTCGC GAACGTGAAG GAAGACGGCT TCGAGAACAA TCCGCATCTC 
GACGCGGTGC GCCGGTACGC GGAAAGCGAG AAGTCGCCGG TCGTCGCGGT GTGCGCGGCG 
ATCGAGGCGG AGATCGCCGA TCTCGACGAT GCCGACAAGG AAGCGTTCCT CGCCGACATG 
GGCATGGACG AGCCGGGCCT CGACCGCGTG ATCCGTGCGG GCTTCAAGCT GCTCGGGCTG 
CAGACGTACT TCACCGCGGG CGTGAAGGAA GTGCGCGCGT GGACGATCCA CATCGGCGAC 
ACCGCGCCGC AAGCGGCGGG CGTGATCCAT ACGGATTTCG AGCGCGGCTT CATTCGCGCG 
CAGACGATCG CATACGACGA TTTCATCGCG TACAAGGGCG AGCAAGGCGC GAAGGAAGCG 
GGCAAGATGC GCGCGGAAGG CAAGGAATAC GTCGTGCACG ATGGCGATGT GATGAACTTC 
CTGTTCAACG TCTGA 

 

Protein sequence

MSLKCGIVGL PNVGKSTLFN ALTKAGIAAE NYPFCTIEPN VGVVEVPDAR LKALAEIIKP 
ERVVPAVVEF VDIAGLVAGA SKGEGLGNQF LANIRETDAI THVVRCFEDE NVIHVAGKVS 
PLDDIEVINT ELALADLGTV EKALARYSKA AKSGNDKEAA KLVAVLDKAR AHLDQGKAVR 
GLDLSDDERA LLKPFCLITA KPAMYVANVK EDGFENNPHL DAVRRYAESE KSPVVAVCAA 
IEAEIADLDD ADKEAFLADM GMDEPGLDRV IRAGFKLLGL QTYFTAGVKE VRAWTIHIGD 
TAPQAAGVIH TDFERGFIRA QTIAYDDFIA YKGEQGAKEA GKMRAEGKEY VVHDGDVMNF 
LFNV