| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0506 |
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| Symbol | |
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| ID | 4677679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 512954 |
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| End bp | 514813 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639843032 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_990115 |
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| Protein GI | 121597435 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.824568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGCC CACCGTTTCT TTCATCGCCC AAGCGCGCGC TGCCGATCGC GCTCGCGCTC
AGCCTCGCCG GTTGCTCGAT GGAGCCGGCC TACCAGCGGC CCGATGCGCC GATGCCGTCC
GCGTATCCGA ACGGCCCCGC CTACGCGACG CCGGGCGCGC CGCGCGCGAA CCCGGGCGAG
CCGGCGGCGG CCGAGCTCGG CTGGCGGAAT TTCCTCGCCG ACGCGCAGTT GCAGCAGCTC
GTCGCGCTCG CGCTCGCGAA CAACCGCGAC CTGCGCGTCG CGACGCTCGA CATCGACGAA
GCGCGCGCGC TGTACCGCAT CCAGCGCGCC GCGCAGTTTC CCGCAATCGA TGCGAGCGTC
GGACTCACGA GCCAGCGCAT GAGCCCCGCG CTGCGCGCGC CGGGGCAGTC CGCGGCGATC
AACAGCTATG ACGCGAGCGT CGGCCTCACC CATTTCGAGA TCGACCTGTT CGGCCGCGTG
CGCAGCCTGA GCCACGCCGC GCAGGAGCAA TACCTCGCGA CAGAGGAGGC GCGGCGCAGC
GTCCACATCA GCCTCGTCGC CGAAGTCGCG AACACCTACC TGACGCTGCT CGCCGATCGC
GCGCTGCTCG CGCTCGCGCA GGACACGCTC AGGAGCCAGC AGGACGCCGC CGACATGATC
CACCGCGGCA AGCAGGCGGG CGCGATGGCG CAGCTCGACG AGCATCGCGC GGACACGCAG
GTGCAGACCG CACGCGTCGC CGCCGAGCAA TACACGCGGC AGATCGCGCA GGACGAGAAC
GCGCTTGCCG TGCTGATCGG CGGGCCGCTG CCGGCCGGCG TGTCGCGCGC GGCGCCGCTC
GACGATCGCG CGCTGCTCGC GGAGTTCCCG GCGGGCCTGC CGTCGACGCT GCTCGAGCGC
CGCCCCGACA TCATGGCCGC CGAGCATCGG CTCATCGCCG CGAACGCGAA TATCGGCGCG
GCGCGCGCGG CGTTCTTCCC GAGGATCACG TTGACGGGCG CGCTCGGCGT GGCGAGCGCG
AGCCTCGCGG GGCTGTTCTC CGGCGGCGTC GCGTGGCTGT TCGTGCCGCA GCTCACGCTG
CCGATCTTCA ACGCGGGCAG CAATCAGGCG AATCTCGATC TCGCGACGGT GCGCCGCGAC
ATCAACGTGG CCGGCTATGA GCACACGATC CAGGACGCGT TCCGCGAGGT CGCCGACAAC
CTGGCCGCAC GCGCGACCTA CGAGCGGGAA GTGAAAGCGC AGGAGGCGAT GATCCGCGAC
CTGGCCGAGA CGAAGCGGCT GGCCGACATG CGTTTTCGCA ACGGCGTCGA CGACTACTTC
GGCGTGTTCG ATGCGCAACG CCAGCTGTTC GCCGCGCAGC AACTGCTCGT CACCTACAAG
CTTGCCGGGC TGACGAGCCG CGTGACGCTA TACAAGGCGC TCGGCGGCGG CTGGGTCGAG
TCGGCGGGCG CGGCGGCCGC GCAACCGCGG ACGGGGCAGG CCGCGCCGAT GGCTCGACCG
GCAGCCACTC CACCCCAGAC GACGCGACCC GCGCCGGTTG CTCGATCGCA GACGGTTCCA
CCGCGAACGG TTCAGCCCCC GATCGCCCAA CCGGCAACCG CGCAACCGCA AACGGCGCAA
GCCGCGCCGG TTGCTCAGTC GCAGACGATT CCACTGCGAA CGGTCCAGCC TCCTATCGCC
CAATCGTCAA CCTCTCAACC GCAAACGGCG CAAGCCGCGC CGATCACTCA AGCGCGGACG
ACACCACTCC GAACGGCTCA GCCGCCCGCC GCTCGACAAC AGGCGCCGCA ATCCGCTCCG
GCGGCTCAAC CGGAGGCAGT TCCACCGCAA ACGGCCCAAC CGCCGATTTT TCAGCCGTAA
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| Protein sequence | MHSPPFLSSP KRALPIALAL SLAGCSMEPA YQRPDAPMPS AYPNGPAYAT PGAPRANPGE
PAAAELGWRN FLADAQLQQL VALALANNRD LRVATLDIDE ARALYRIQRA AQFPAIDASV
GLTSQRMSPA LRAPGQSAAI NSYDASVGLT HFEIDLFGRV RSLSHAAQEQ YLATEEARRS
VHISLVAEVA NTYLTLLADR ALLALAQDTL RSQQDAADMI HRGKQAGAMA QLDEHRADTQ
VQTARVAAEQ YTRQIAQDEN ALAVLIGGPL PAGVSRAAPL DDRALLAEFP AGLPSTLLER
RPDIMAAEHR LIAANANIGA ARAAFFPRIT LTGALGVASA SLAGLFSGGV AWLFVPQLTL
PIFNAGSNQA NLDLATVRRD INVAGYEHTI QDAFREVADN LAARATYERE VKAQEAMIRD
LAETKRLADM RFRNGVDDYF GVFDAQRQLF AAQQLLVTYK LAGLTSRVTL YKALGGGWVE
SAGAAAAQPR TGQAAPMARP AATPPQTTRP APVARSQTVP PRTVQPPIAQ PATAQPQTAQ
AAPVAQSQTI PLRTVQPPIA QSSTSQPQTA QAAPITQART TPLRTAQPPA ARQQAPQSAP
AAQPEAVPPQ TAQPPIFQP
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