| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0322 |
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| Symbol | |
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| ID | 4678296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 340955 |
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| End bp | 342106 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639842850 |
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| Product | putative outer membrane porin |
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| Protein accession | YP_989933 |
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| Protein GI | 121597478 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.12048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGATC GTTTCGCGCG CGGCCACCGC CCGCGTCATT TGGAGCAAAG GTCAGGAGAT
CAGATGGTCA AGCATGCGGC AGCAACATTA CTCGGCGCGC TCGCCGTCGC CGGCGCGTGG
GCGCAGAGCA GCGTCACGCT GTACGGCAGC CTCGACGCCG GCGTCGCGTA CGTGAACAAC
GTCGGCGGCG GCGCGAAGTG GTCGATGATT CAGGGCAACA CGCAGCCCGA TCGATGGGGG
CTGAAGGGCG TCGAGGATCT GGGCGGCGGT CTGAAGGCGA TCTTCCAGCT CGAAAACGGC
TTCTATACGA ACAACGGCCA GATGGCGGCG GCGGGCACGA TGTGGAACCG TCAGGCGTTC
GTCGGCCTGA ATTCCGACCG GCTCGGCGCG CTGACGCTCG GCCACCAGAC GCCGTTCAAC
TTCGACTGGC TCGACCCGCT GTCGAGCGCA TTCCTCGCGC AGAGCTGGTA TGCGTTCCAT
CCCGGCAACC TCGACCAGCT CGCGGACACC AGCACCGTGC CGTTCAACAA CTCGGTCAAG
TACCGGTCAC CCGTCTTTGC GGGCTTCACG GTGGGCGCGA TGCTCGGCTT CGGCAACACG
ACGAACTTCT CGACCGGCCG CACGATGAGC TTCGGCGTGA ACTACGCGAA CGGCCCGTTC
AAGGCGGCCG CCGTCTATTC GAACGAGCAC GACCAGGCGT TCCCGATGGC GACCGTCGGC
GGCATCGCCG GGCCGGGCGG CACGTTCCAG GGCATGCCCG TCGCGAGCTA TGTCGCGAAG
AAGGCGCAGA ACATGGGCGC GGGCCTGTCG TACCGCTTCG GCCCGCTGCT CGTGCACGGC
CTTTACACGC GCGTGAAACT GCAGGCGAAC GGCCACTCGG ATACGTTCCA GAGCTACGAC
GCCGGCGCGA ACTACCAGAG CTCGCCGTTC AACGTGATCG CGGGCGGCGC GGCGACTTCG
ACGCTCGCCG GCCGCCGCTG GAGCCAGTTC GAGCTCGGCG ACACGTATTC GCTGTCCAAG
CGCACGCAGC TCTACGTGAA CGTGCTGTAC GAGCACGCGA GCGGCAACGC GAAGGCCGCG
TTCTTCACGG CGGGCGCGTC GAGCACGGCG AATCAGGTGA TTGTCCTGAC GGGGATTCAC
CACTCGTTCT GA
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| Protein sequence | MADRFARGHR PRHLEQRSGD QMVKHAAATL LGALAVAGAW AQSSVTLYGS LDAGVAYVNN
VGGGAKWSMI QGNTQPDRWG LKGVEDLGGG LKAIFQLENG FYTNNGQMAA AGTMWNRQAF
VGLNSDRLGA LTLGHQTPFN FDWLDPLSSA FLAQSWYAFH PGNLDQLADT STVPFNNSVK
YRSPVFAGFT VGAMLGFGNT TNFSTGRTMS FGVNYANGPF KAAAVYSNEH DQAFPMATVG
GIAGPGGTFQ GMPVASYVAK KAQNMGAGLS YRFGPLLVHG LYTRVKLQAN GHSDTFQSYD
AGANYQSSPF NVIAGGAATS TLAGRRWSQF ELGDTYSLSK RTQLYVNVLY EHASGNAKAA
FFTAGASSTA NQVIVLTGIH HSF
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