| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0139 |
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| Symbol | |
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| ID | 4677313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 129935 |
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| End bp | 132700 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639842670 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_989754 |
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| Protein GI | 121596654 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0354912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCACGC GCGCCGCATG CCTCATCGAA ATTTTTTCGC CGGGCCTGAG CTGTTTTCGA
TGCTCGCGTG ACATGGGAAA TGAAGGCTGC ATTCCACCCA TCGTCAACGA GTCATCGATC
ATGGATTCAA TCTGCAATCG CCGCCCCCGC CGCGCGCACG CCGGCGTGTG CGCGGATACG
GCGCACGCGC CGGCCGGTTT GCCCGAGGCG GCTCAGCCCG CCGCGCGGCT CGGCGCAGGC
CGGCCGCGCG ACGCGGCCGC GCCGCGATGC GCGCGGCAAG CCACATCGCA CACATCGCAC
GCGTCGCACA CGTTGCACGC GCCGTGCATG CCGCAATTCG CCCCGCGCCG CGTCGTCGCG
CGCGTGGCCG CCGCCGCGCT GTTCTCCGCG TGCGCCGCGC CGGGCGTATC GGGCGCGGCC
GAGCCGGCCG CCGCGACGCG CGGGTACGAC ATTCCGGCGG GCCCGCTCGA CGCGGCGCTG
ACCCGCTTCG GCCGCGAGGC CGGCATCCTG CTGTCGTTCC CGGGCGAGCT GACCACGGGC
CTGCGAAGCC CCGGGCTGCA CGGCCGCGCG GATCCGGCCG CGGCGCTCGA CCGGCTGCTG
ACGGGCACGG GGCTCGTCGC GCTCCGGCAG CCGAGCGGCG GCTACACGCT CGCCAGGCTG
CCCGGGCCGG CCGCCGCCGG CGCCGATGCC GCGCTCGCGG CCGACACGAC GCTGCCCACC
GTCGCCGTGC GCGCGAGCGG CCCGCACGCG GACAGCTACC GGCCGCCGCG CGAGGCGGCG
GGGCTGCGCA GCGACGCGCC GCTCGCCGAG GTGCCGCAAG CGGTCGCCAT CGTCGCGCAG
CAGGTGCTGC GCGACCAGCG CCCGCGCAAT CTCGACGACG CGCTTGCGAA CGTGAGCGGC
ATCACGCAGG GCAACACGCT CGGCAGCACG CAGGACACGG TGATGAAGCG CGGCTTCGGC
GACAACCGCG ACGGCTCGGT GATGCGCAAC GGAATGCCGA TCGTGCAGGG CCGCTCGCTG
AACGCGACGA CGGACAGCGT CGAAGTGCTG AAGGGCCCGG CCTCGCTGCT GTACGGAATC
ATGGACCCGG GCGGCGTGAT CAACGTCGTC ACGAAGCAGC CGCAGCTCGC GCGCCGCCAC
GCGATCTCGG CGCTCGGCTC GACGTACGGC GGCGGCAGGA ACGGCGGCGA GCTCACGTTC
GACTCGACGG GCGCGATCGG CGAGTCGCGC GTTGCATACC GGCTGATCGT CGATCAGACG
AACGAACAGT ATTGGCGCAA CTACGGCGAG CACCGCGAGA CGCTCGTCGC GCCTTCGCTC
GCGTGGTACG GGCGCGATAC GCAGGTGGTG CTGTCGTACG AGTACCGGCG CTTCCTGATG
CCGTTCGATC GCGGCACCGC GCTCGATCCG CGCACGAACG CGCCGCTCGC GATCCCGGCG
CGCCGCCGGC TCGACGAGCC GTTCAACGAC ATGCGCGGCG AATCGAATCT CGCGCAGCTC
GCGATCGATC ATCAGCTCGC GCCGGACTGG AAGGTGCACG TCGGCTACAG CTACAACCGG
GAGACCTACG ATGCGAACCA GATTCGCATC ACGGCGGTCG ATCCGCTCAA GGGCACGCTC
ACGCGCAGCA ACGACGCGAC GCACGGTTCG CGCAGCACCG ACAGCTACGG CATCGCGTAC
GTCGACGGCC GCGTGACGCT CGCCGGGATG CGGCACGACG TGCAGTTCGG CGTCGACGGC
GAATACCGGC AGGTCTACCG CGCGGACATG CTGCGCCAGC CGATCAAGAC GCCGTTCAGC
TATCTGAACC CGACGTACGG GCTCGTCCCG CCGTCGACGA GCGTATCGGC CTCCGACAGC
GACCAGAGCG ACACGCTGCA CACCGCCTCG CTGTTCTTCC AGGACAGCAT CCATCTGAGC
GAGCGGTGGA TGCTCGTCGG CGGCGCGCGC TGGGTCCGCT ACAGCCAGCT TGCCGGGCGC
GGCCGGCCGT TCCAGGTCAA CACGAACCTG AGCGGCACGA AGTGGCTGCC GCGCGCGGGC
ATCGTCTACA AGTGGAACGA CGCGCTGTCG CTGTACGGCA GCTACACGCA GTCGCTGAAG
CCGACCTCGA AGATCGCGCC GATGGCGGGC GGCTACGTGA TCGACGGCTC GACCGCGCCC
GAGGAAGGCG CGTCGTGGGA GCTCGGCGCG AAGCTCGACA TGCCGGGCGG CCTCGCCGGT
ACGCTCGCGT TCTTCGACAT CGACAAGAAG CACGTGCTCG TCTCGCAATA CGACGACGCG
ACGAACCAGA CCGCGTGGCG CACGTCCGGC CGCGCGCGCT CGCGCGGGAT CGAGCTCGAC
GTGTCGGGGC GGATCGGTGC GCGTTGGAAC GTGATCGCGA GCTACGCGTA CATCGACGCG
AAGACGACCG AAGATCCGCT GTACGCGGAC AACCGGCTGT GGAACGTCGC GCGGCACACG
GCCTCGCTCG CGGCGGTCTA CGACGTGGGC ACGGTGCTCG GCGGCGACGA CCTGCGCATC
GGCGCGGCGG GGCGCTACGT CGGCGCGCGC CCGGGCGATT CGGCCAACAG CTTCACGCTG
CCGGCGTACG CGACCGCCGA CGCGTTCGCG ACCTACGACA CGCGGCTCGG CAAGCAGAAG
CTGCAGTTCC AGCTCAACGT GAAGAATCTG TTCAACCGCA CGTATTACCC GTCGAGCGTG
AACCGGTTCT TCGTGTCGGT GGGCGACGCG CGGCAGGTGT CGCTGCTGAC GACGCTGCAG
TTCTGA
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| Protein sequence | MRTRAACLIE IFSPGLSCFR CSRDMGNEGC IPPIVNESSI MDSICNRRPR RAHAGVCADT
AHAPAGLPEA AQPAARLGAG RPRDAAAPRC ARQATSHTSH ASHTLHAPCM PQFAPRRVVA
RVAAAALFSA CAAPGVSGAA EPAAATRGYD IPAGPLDAAL TRFGREAGIL LSFPGELTTG
LRSPGLHGRA DPAAALDRLL TGTGLVALRQ PSGGYTLARL PGPAAAGADA ALAADTTLPT
VAVRASGPHA DSYRPPREAA GLRSDAPLAE VPQAVAIVAQ QVLRDQRPRN LDDALANVSG
ITQGNTLGST QDTVMKRGFG DNRDGSVMRN GMPIVQGRSL NATTDSVEVL KGPASLLYGI
MDPGGVINVV TKQPQLARRH AISALGSTYG GGRNGGELTF DSTGAIGESR VAYRLIVDQT
NEQYWRNYGE HRETLVAPSL AWYGRDTQVV LSYEYRRFLM PFDRGTALDP RTNAPLAIPA
RRRLDEPFND MRGESNLAQL AIDHQLAPDW KVHVGYSYNR ETYDANQIRI TAVDPLKGTL
TRSNDATHGS RSTDSYGIAY VDGRVTLAGM RHDVQFGVDG EYRQVYRADM LRQPIKTPFS
YLNPTYGLVP PSTSVSASDS DQSDTLHTAS LFFQDSIHLS ERWMLVGGAR WVRYSQLAGR
GRPFQVNTNL SGTKWLPRAG IVYKWNDALS LYGSYTQSLK PTSKIAPMAG GYVIDGSTAP
EEGASWELGA KLDMPGGLAG TLAFFDIDKK HVLVSQYDDA TNQTAWRTSG RARSRGIELD
VSGRIGARWN VIASYAYIDA KTTEDPLYAD NRLWNVARHT ASLAAVYDVG TVLGGDDLRI
GAAGRYVGAR PGDSANSFTL PAYATADAFA TYDTRLGKQK LQFQLNVKNL FNRTYYPSSV
NRFFVSVGDA RQVSLLTTLQ F
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