Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0098 |
Symbol | |
ID | 4677780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 90960 |
End bp | 92333 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639842631 |
Product | major facilitator family transporter |
Protein accession | YP_989715 |
Protein GI | 121596669 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.381076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGAATC CGGACGATTC GGCCGGGGCG GACATTCGAG TGAGGAGAAA CGCATTGACC CGGGGCATCC CACCGAGCCC GCCGGCGCGC CAGCCGCGCC GCGCGGCCGG CGCCGCGTTC GTCGGCACGA TGATCGAGTG GTACGACTTC TACATCTACG CGAACGCGGC CGCGCTCGTC TTCGGCGAGC TGTTCTTCCC GTCGCACGAT CCGTTCACGA GCACGATGGC GTCGTTCGCG ACGTTCGCGG TCGGCTTCTT CGCGCGCCCG CTCGGCGGGC TCTTCTTCGG CCATCTCGGC GACCGGATCG GCCGCAAGAA GGCGCTGATG GCGACGCTCG CGCTGATGGG CGCGGCGACG GTCTGCGTCG GTCTGCTGCC GACCTACGAA CGCGTCGGCC TGCTCGCGCC CGTGCTGCTC GTGCTGCTGC GCATCGTTCA GGGCATCGCG GTGGGCGGCG AGTGGGGCGG CGCGGTGCTG ATGGCGGGCG AGCATGCGCC GTATGGGCGG CGCACGTTCT TCGCTTCGTT CGCGCAGTTG GGCAGCCCGG CCGGGCTGAT CCTGTCGCTC GTCGCGTTTC GCGCGGTCGC GTCGATGGAG CACGGCGCGT TCATGTCCTG GGGCTGGCGG CTGCCGTTTC TCGCGAGCAT CGCGCTGCTC GCGGTCGGCG TGTTCGTGCG GCTGAAGGTC GACGAATCGC CCGAGTTCGC GCATGAGAAG GCGATGTCGC GCACCGTCGC GCGGCCGCTC GCCGAGGCGC TGCGCACGTC GCGCGCGATG CTGCTGTTCT GCCTGTGCGC GAACACGATC GGTATCGCGG GGCTGTATTT CACGAACACG TTCATGATCG CGTTCACGAC GCAGCATGTG GGCGTGACGA AATCGCTGAT CCTCGATTGC CTGTTCATCG TCGCGATCAT CCAGTTCGTG ACGCAGCCGA TCGCCGCGTG GCTCGGCGGC AAGCTCGGCG ACGCACGCTT TCTCAAGCTC GCCGCGCTGT TCGCGATGGC CTCGCCCTAT CCGATGTTCG CGCTCGTGCA GACGGGGCGG CTCGCGCCGA TGGTGATCGG CATCGCGATC GCGACCGTGT TTCTCGCCGG TTTCTACTCG GTGATCGCGG GCTTCGTGAG CGGCGCGTTC CCGACGCGCG TGCGCTATTC GGCGATCTCG ATCTCGTACC AGATGTGCGG CGCGATCGCG GGCGGGCTGA CGCCGCTCGT CGGCACGTGG CTCGCGCACC GGTTCGCCGG GCAGTGGTGG CCGCTCGCGG TGTTCTATAC GTGCCTCGCG GCGCTCTCGC TCGGCGGCGT GATCGCGCTC GACGCGCGCC GCCATCGGCG GGCCGACGTC GCCGACGCCG TGCTCACGCG CTGA
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Protein sequence | MPNPDDSAGA DIRVRRNALT RGIPPSPPAR QPRRAAGAAF VGTMIEWYDF YIYANAAALV FGELFFPSHD PFTSTMASFA TFAVGFFARP LGGLFFGHLG DRIGRKKALM ATLALMGAAT VCVGLLPTYE RVGLLAPVLL VLLRIVQGIA VGGEWGGAVL MAGEHAPYGR RTFFASFAQL GSPAGLILSL VAFRAVASME HGAFMSWGWR LPFLASIALL AVGVFVRLKV DESPEFAHEK AMSRTVARPL AEALRTSRAM LLFCLCANTI GIAGLYFTNT FMIAFTTQHV GVTKSLILDC LFIVAIIQFV TQPIAAWLGG KLGDARFLKL AALFAMASPY PMFALVQTGR LAPMVIGIAI ATVFLAGFYS VIAGFVSGAF PTRVRYSAIS ISYQMCGAIA GGLTPLVGTW LAHRFAGQWW PLAVFYTCLA ALSLGGVIAL DARRHRRADV ADAVLTR
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