| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0067 |
|---|
| Symbol | |
|---|
| ID | 4677494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | + |
|---|
| Start bp | 61570 |
|---|
| End bp | 62382 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639842600 |
|---|
| Product | putative sugar ABC transporter, permease protein |
|---|
| Protein accession | YP_989684 |
|---|
| Protein GI | 121596714 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.864372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGAC TGATCGCACG CGGCGGCACC GTCGCCATCG GCGGCGCGAT CGCGCTCGTC
GCCGTGTTTC CGCTCGCGTG GGCGCTCCTC AATTCGTTCA AGCGCCTGCT CGACATCGTC
ACGCTGACGC CGCGCTTCAT CTTCACGCCG ACGCTCGACA ACTACCGGCA GGTGCTGTCG
AGCCCCGAGG TGCTGATCGG CCTCGGCAAC AGCGTCGCGA TCGTCGGCGT GGCCGTCGCG
CTCGGCGCCG CGCTGGGCGT GCCCGCCGCG TACGCGATCG CCCGCTATCC GGTGCGCGGC
AAGCGCGACA TCCAGTTCTT CCTGCTGTCG CTGCGCTTCT TGCCGCCCGT CGCGGTCGCG
ATTCCGCTGA TCGCGATCTG GGTCGACCTC GGGCTCTACG ACACGAAGCT GTCGATGATC
GTCACGTACC TGCTCGTCAC GCTGTCGACA ATCACATGGC TGTCGATCCC CGTGTTCCGC
CGGCTGCCGC GCGAAATCGA GGAGGCGGCC GCGCTCGACG GCTACGGGCC GTACGCGGTG
TTCTGGCGCG TCGCGCTGCC GGTCTGCGCG AGCACGCTGC TCGGCGGCAT CGTGTTCAGC
TTCGTGCTCG TCTGGAACGA ACTGATGATC GCGCTCGCGC TCACGTCGTC GCGCGCGGCG
ACGCTGCCCG TCGTCGCGTC CGCGTTCACG TCGCTCGGCC AGGAGGTGCC GTGGGGCGTG
ATCAATGCGT CCACCGTGCT GCTCGCGCTG CCGCCGCTCG TCTTCGTCGG CATGCTCAGC
CGCCTGCTGA ACTCGATGCT CAAAGGCCGA TAG
|
|---|
| Protein sequence | MGRLIARGGT VAIGGAIALV AVFPLAWALL NSFKRLLDIV TLTPRFIFTP TLDNYRQVLS
SPEVLIGLGN SVAIVGVAVA LGAALGVPAA YAIARYPVRG KRDIQFFLLS LRFLPPVAVA
IPLIAIWVDL GLYDTKLSMI VTYLLVTLST ITWLSIPVFR RLPREIEEAA ALDGYGPYAV
FWRVALPVCA STLLGGIVFS FVLVWNELMI ALALTSSRAA TLPVVASAFT SLGQEVPWGV
INASTVLLAL PPLVFVGMLS RLLNSMLKGR
|
|---|
| |