Gene BMASAVP1_0053 details

Gene Information

• Locus tag: BMASAVP1_0053
• ID: 4677459
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 50479
• End bp: 52452
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639842586
• Product: hypothetical protein
• Protein accession: YP_989670
• Protein GI: 121597023
• COG category: [V] Defense mechanisms
• COG ID: [COG4257] Streptogramin lyase

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCACA TTCGCTTGAA ACGGGCCTCG TTCCTGTTGC TGCTCGGCGC GCAGGCCGTG 
AGCCTCGGCG CCGCGGCCGG CACGCTGTCG GGCACCGTCT CGTCGGCCGG CACGCCGCTC 
GCCGGCGCGA TGGTCACCGT GTTCGACGCC GCGCAGGCGC GCCGCGACAC CGTCTACACC 
GACCACAACG GCCGCTACCG CATCACCGTC GATTTTGCGG GCGAACTGCG CATGCGGGCG 
CGCACGCCGT ATTTCAAGGA CGCCGCGCAA GACCTCGCGC TCGCGCCCGA CGCGAGCAAG 
ACGCTCGACT TCTCGCTCGC GCGGCAGACG GTGGCCGACG AGCTGTCCGC GAGCCTGCCC 
GCGTCCGCGC ACCTGGCCAC GCTGCCGTGG AGCAGCCAGG ACTCGCGCAC GGCCTTCATC 
AGCCAGTGCA ACTACTGTCA CCAGGTCGGC AACGCGCTCA CGCGCACGCC GCGCGACGAG 
GCCGCCTGGG GCGCGACCGT GCGCCGGATG GAGGGCTACG CGGCGCTGCT CACGGACCGG 
CAGGCGCGCG ACATCACGCA CACGCTCTAT CAGGGAATGA ACGCTCACGC GGTCGCGGCG 
GTGGAGAAAT ACCTGTACGA CGATCGGCTC GCGCCCGCGA AGATCCGGGA ATGGGCGGCG 
GGCGACGGCC TCACGTTCAT CCACGATGCG GACGTCGGCT TCGACGATCA CCTGTACGGT 
GCCGACGAAG GCCACGACAA GATCTGGGAA CTCGACCGCA AGACCGGCAA GCTCACCGAA 
TGGAAGGAGC CCGACGTCGA TCTGCCGGTG GGCGGCATCT TCTCCGGCGT GCAGTTGCCG 
ATCGGCGTGT TCAGCGGCAA GCACGGGCCG CACAGCCTCG CGCAGGCGCC CGACGGCCGG 
TTCTGGATCA CCAACGCGCT ATCCTCGACG CTCGCTTCGT TCGATCCGGC GACAAAGCGC 
TTCAAGCTCT ACGAGCTCGG CCACTCGCAC CTGTATCCGC ACACGTTGCG CATCGACCGC 
GCGGGCATCG TCTGGTTCAC GATCGTCGCG TCCAACGAGG TCGCGCGCTT CGATCCGAAA 
ACCGGGCGGT TCACGATCAT CCATCTGCCC GACGGCGGCA TCTGGCGCGC GATGTCGCAT 
TATCTGTTTC CGCTCGTCGT GAAAATGGCC GCGTGGTTCC CGGGCCAGAA CCTGCACCTC 
GCGCTCACGC ATCACAAGTG GGCGTTCCAG GGCCGCGACG CGTTCCCGTT CCCGTACGGG 
ATCGACGTGA ATCCGGTCGA CGGCTCGATC TGGTACGCAA AGCTCTATGC GAACAAGATC 
GGCCGCATCG ATCCGAAGAC ACTCGCGGTG ACCGAATTCG ACACGCCGCT CGGCGGCCCG 
CGGCGGCTGC GCTTCGATCC GCAGGGCAAT CTGTGGATCC CGGCGTTCGA CGACGGCGGG 
CTGATGAGAT TCGATACGCG CACGCACCGC TTCGAGACCT TCAAGCTGCC GCTTCTCGCG 
CACAACGAAT ACGAGGTGCC GTATGCGCTG AACGTGCAGC CGAAGACGGG CGACATCTGG 
ATCACGTCGA ACATGTCCGA CCGGATCTTC CGCTTCGTGC CGAGCACGCA GACCTTCATC 
ACGTACCCGC TGCCGACGCG CGTCACGTGG CTGCGCGACA TGACGTTCAC GCAGGACGGC 
GCGGTGTGCT CGAGCTCGTC GAACCTGCCC GCGTACGGGA TCGAAGGCGG ACGGGCGTCG 
TTCATCTGCC TGTATCCGGA CGGCGAACGC GGCGGCACGG CGGCGAATGC GGCCGGCAAC 
GCCAACGCGG CCGCGAACCT CGCGCGGGTC CGCGCCGCGG CCGCGCGCGG GACGCCGGAG 
CGCACCGCGC CGGCTCGCGC CGCGCTCGCC CGCGCCGGCT CGAACCGGGA CGGCGCCATC 
CAGACCGCGG CCATTCAAGC CGACGGCACA CGCACCGATC GTTCGGCACA CTAA 

 

Protein sequence

MIHIRLKRAS FLLLLGAQAV SLGAAAGTLS GTVSSAGTPL AGAMVTVFDA AQARRDTVYT 
DHNGRYRITV DFAGELRMRA RTPYFKDAAQ DLALAPDASK TLDFSLARQT VADELSASLP 
ASAHLATLPW SSQDSRTAFI SQCNYCHQVG NALTRTPRDE AAWGATVRRM EGYAALLTDR 
QARDITHTLY QGMNAHAVAA VEKYLYDDRL APAKIREWAA GDGLTFIHDA DVGFDDHLYG 
ADEGHDKIWE LDRKTGKLTE WKEPDVDLPV GGIFSGVQLP IGVFSGKHGP HSLAQAPDGR 
FWITNALSST LASFDPATKR FKLYELGHSH LYPHTLRIDR AGIVWFTIVA SNEVARFDPK 
TGRFTIIHLP DGGIWRAMSH YLFPLVVKMA AWFPGQNLHL ALTHHKWAFQ GRDAFPFPYG 
IDVNPVDGSI WYAKLYANKI GRIDPKTLAV TEFDTPLGGP RRLRFDPQGN LWIPAFDDGG 
LMRFDTRTHR FETFKLPLLA HNEYEVPYAL NVQPKTGDIW ITSNMSDRIF RFVPSTQTFI 
TYPLPTRVTW LRDMTFTQDG AVCSSSSNLP AYGIEGGRAS FICLYPDGER GGTAANAAGN 
ANAAANLARV RAAAARGTPE RTAPARAALA RAGSNRDGAI QTAAIQADGT RTDRSAH