Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0023 |
Symbol | |
ID | 4677081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 21914 |
End bp | 24472 |
Gene Length | 2559 bp |
Protein Length | 852 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639842556 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_989640 |
Protein GI | 121597791 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.16452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTACG GATCGAACGA ACTCTACGCG GCGATGCGGC AGCGCCGCGA TCGCCTGCCG CGCGCGCACC CGGCGGACGG CTACGGCGCG CCGGCGCGCC TGAAGAGCGG CATGGGCTGC ACCGAATGCG GCGCGCTGTA CGACGACGGC CGCTGGAGCT GGCACGCGGC GGCGGGCGCG CTGCTGCAGA TCGTGTGCCC CGCGTGCCGC CGGATTCGCG AGCGCGGGCG AGCTCGTGCT CGAAGGCGGC TACTTCGCGC GCCGCCGCGA CGACATCGTC GCGCTGCTGC GCCGCCACGC GGGCGACGAC ATCAACGCGC GCCCGCTCGG ACGCATTCTG TCGATCGACG CGCTGCCCGC GCGCATGGTC GTGCGCACGA AGGGCTCGCC CCTCGTGCAC CGGCTCACCG AGGCGCTCGT GCGCACGCAC CGCGGCGATC TCGAGATCGA CTATCGCGAA GGCGAGGACA CGCTGCGCGC GCACTGGATG CGCGACGCCG CCTAGCGTCC GCGGCCGTCG ATTCTTCCGC ATCGCACAAC GCACGCCCAG GCATCCCGAT GAAGAGCGAA ACCGGATACA TGGGATTCGT CGTCGTGCTC GTGTTCATGG TGCTGCTCGC GCTGCAGCTC GCCACGCTCA GCGCGCCGGC CACGCAGATC GCGTACAGCG ACTTTCGCAA GCTCGCCGCG GCCGCGCAGC TCGACGATCT CGAAGTCAGC CCGACGCGCA TCACGGGCGT GCTGCGCAGT GCGTCCGCGG CGGCGGCGCT GCCCGCCTCC GACGCGGAGG CGATCAAGCG CGCGGGCACG CCGTGGCGCT TCTCGACAAA GCGCGTGACC GACGAGCGCC TGATCGACAC GCTCGCCGCG ACGGGCACCC GCTATCGCGG CGCCGACGAC GACACGTGGA TCGGCACGCT CGCATCGTGG ATCGTGCCGA TCGCGGTGTT CGCGCTCGTC TGGAACCTGA TGCTGCGGCG CCCGCGCGGC GGCCTGCAGG ACTGGTCGGG CGTCGGCAAG AGCAAGCCGC GCGTCTATGT GGAGGCGAAG ACCGGCATCG ATTTCGACGA CATCGCGGGC ATCGACGAGG CGAAGGCCGA GCTCCAGCAG ATCGTCGCGT TTCTGCGCGC GCCCGCGCGC TACCAGCGGC TCGGCGGCAA GATCCCGAAG GGCGTGCTGA TCGTCGGCGC GCCCGGCACC GGCAAGACGC TGCTCGCGAA GGCGGTGGCG GGCGAGGCGG GCGTGCCGTT CTTCTCGACG AGCGGCTCGT CGTTCGTCGA GATGTTCGTC GGCGTCGGCG CGGCGCGCGT GCGCGATCTG TTCGAGCAGG CGCAGCAAAA GGCGCCGTGC ATCATCTTCA TCGACGAGCT CGACGCGCTC GGCAAGGTGC GCGGCGCGGG GCTCGCGTCG GGCAACGACG AGCGCGAGCA GACGCTGAAC CAGTTGCTCG TGGAGATGGA CGGCTTCCAG GCGAACTCCG GCGTGATCCT CATGGCGGCG ACCAATCGTC CGGAGATTCT CGATCCCGCG CTGCTGCGCC CGGGCCGCTT CGACCGCCAC ATCGCGATCG ACCGGCCGGA CTTGACGGGG CGCCGGCAGA TCCTGTCGGT CCACGTGAAG CACGTGAAGC TCGGCCCGGA CGTCGATCTC GGCGAGCTCG CGTCGCACAC GCCCGGCTTC GTCGGCGCGG ATCTCGCGAA CATCGTCAAC GAGGCGGCGC TGCACGCGGC CGAGCTCGAC AAGCCCGCGA TCGACATGTC CGATTTCGAC GAGGCGATCG ACCGCGCGAT GACCGGCATG GAACGCAAGA GCCGCGTGAT GAGCGAGCGC GAGAAGATCA CGATCGCGCA TCACGAGGCG GGGCACGCGC TGATCGCGCA GACGCGCGCG CACAGCGATC CGGTGAAGAA GGTGTCGATC ATTCCGCGCG GCATCGCGGC GCTCGGCTAC ACGCAGCAGG TGCCGACCGA GGATCGCTAC GTGCTGCGCA AGAGCGAGCT GCTCGACCGG CTCGACGTGC TGCTCGGCGG GCGCGTCGCC GAGGAGATCG TGTTCGGCGA CGTGTCGACG GGCGCGGAGA ACGATCTCGA GCGCGCGACC GAAATGGCGC GGCACATGGT CGCCCGCTAC GGGATGAGCG AGCGGATCGG CCTCGCGACG TTCGGCGACG CGGACACCCA GGGGCTGTCG CCCCTCGTCT GGCAGCGCGG CGGCGAGCGC TGCAGCGAGA GCACCGCGAC GCGGATCGAC GACGAGATCC AGCGGCTCCT CGCCGAGGCG CACGATCGCG TGTCGCGTAC GCTGAAGGAG CGGCGCGGCG CGCTCGAACG GATCGCCGGG TATCTGCTCG AGCACGAGGT GGTCGATCAC GACAAGCTCG TGAGGCTCGT CAACGACGAG CCGACGCCCG AGCCCGGCGC GCGCGATCCG GGCGGCGACG CGGCGAAGCG AAGCGGCATC GGCGCCGCGC CGGCGAAGCC GCCGGCGGAA GTCGGGAGCG CCGAGCTTCG CGATCCGGCT CGAAAGGCCG ACAACGCGGA CCACTCCGTG CCGCAGTGA
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Protein sequence | MIYGSNELYA AMRQRRDRLP RAHPADGYGA PARLKSGMGC TECGALYDDG RWSWHAAAGA LLQIVCPACR RIRERGRARA RRRLLRAPPR RHRRAAAPPR GRRHQRAPAR THSVDRRAAR AHGRAHEGLA PRAPAHRGAR AHAPRRSRDR LSRRRGHAAR ALDARRRLAS AAVDSSASHN ARPGIPMKSE TGYMGFVVVL VFMVLLALQL ATLSAPATQI AYSDFRKLAA AAQLDDLEVS PTRITGVLRS ASAAAALPAS DAEAIKRAGT PWRFSTKRVT DERLIDTLAA TGTRYRGADD DTWIGTLASW IVPIAVFALV WNLMLRRPRG GLQDWSGVGK SKPRVYVEAK TGIDFDDIAG IDEAKAELQQ IVAFLRAPAR YQRLGGKIPK GVLIVGAPGT GKTLLAKAVA GEAGVPFFST SGSSFVEMFV GVGAARVRDL FEQAQQKAPC IIFIDELDAL GKVRGAGLAS GNDEREQTLN QLLVEMDGFQ ANSGVILMAA TNRPEILDPA LLRPGRFDRH IAIDRPDLTG RRQILSVHVK HVKLGPDVDL GELASHTPGF VGADLANIVN EAALHAAELD KPAIDMSDFD EAIDRAMTGM ERKSRVMSER EKITIAHHEA GHALIAQTRA HSDPVKKVSI IPRGIAALGY TQQVPTEDRY VLRKSELLDR LDVLLGGRVA EEIVFGDVST GAENDLERAT EMARHMVARY GMSERIGLAT FGDADTQGLS PLVWQRGGER CSESTATRID DEIQRLLAEA HDRVSRTLKE RRGALERIAG YLLEHEVVDH DKLVRLVNDE PTPEPGARDP GGDAAKRSGI GAAPAKPPAE VGSAELRDPA RKADNADHSV PQ
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