Gene BMASAVP1_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_0023 
Symbol 
ID4677081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand
Start bp21914 
End bp24472 
Gene Length2559 bp 
Protein Length852 aa 
Translation table11 
GC content71% 
IMG OID639842556 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_989640 
Protein GI121597791 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.16452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTACG GATCGAACGA ACTCTACGCG GCGATGCGGC AGCGCCGCGA TCGCCTGCCG 
CGCGCGCACC CGGCGGACGG CTACGGCGCG CCGGCGCGCC TGAAGAGCGG CATGGGCTGC
ACCGAATGCG GCGCGCTGTA CGACGACGGC CGCTGGAGCT GGCACGCGGC GGCGGGCGCG
CTGCTGCAGA TCGTGTGCCC CGCGTGCCGC CGGATTCGCG AGCGCGGGCG AGCTCGTGCT
CGAAGGCGGC TACTTCGCGC GCCGCCGCGA CGACATCGTC GCGCTGCTGC GCCGCCACGC
GGGCGACGAC ATCAACGCGC GCCCGCTCGG ACGCATTCTG TCGATCGACG CGCTGCCCGC
GCGCATGGTC GTGCGCACGA AGGGCTCGCC CCTCGTGCAC CGGCTCACCG AGGCGCTCGT
GCGCACGCAC CGCGGCGATC TCGAGATCGA CTATCGCGAA GGCGAGGACA CGCTGCGCGC
GCACTGGATG CGCGACGCCG CCTAGCGTCC GCGGCCGTCG ATTCTTCCGC ATCGCACAAC
GCACGCCCAG GCATCCCGAT GAAGAGCGAA ACCGGATACA TGGGATTCGT CGTCGTGCTC
GTGTTCATGG TGCTGCTCGC GCTGCAGCTC GCCACGCTCA GCGCGCCGGC CACGCAGATC
GCGTACAGCG ACTTTCGCAA GCTCGCCGCG GCCGCGCAGC TCGACGATCT CGAAGTCAGC
CCGACGCGCA TCACGGGCGT GCTGCGCAGT GCGTCCGCGG CGGCGGCGCT GCCCGCCTCC
GACGCGGAGG CGATCAAGCG CGCGGGCACG CCGTGGCGCT TCTCGACAAA GCGCGTGACC
GACGAGCGCC TGATCGACAC GCTCGCCGCG ACGGGCACCC GCTATCGCGG CGCCGACGAC
GACACGTGGA TCGGCACGCT CGCATCGTGG ATCGTGCCGA TCGCGGTGTT CGCGCTCGTC
TGGAACCTGA TGCTGCGGCG CCCGCGCGGC GGCCTGCAGG ACTGGTCGGG CGTCGGCAAG
AGCAAGCCGC GCGTCTATGT GGAGGCGAAG ACCGGCATCG ATTTCGACGA CATCGCGGGC
ATCGACGAGG CGAAGGCCGA GCTCCAGCAG ATCGTCGCGT TTCTGCGCGC GCCCGCGCGC
TACCAGCGGC TCGGCGGCAA GATCCCGAAG GGCGTGCTGA TCGTCGGCGC GCCCGGCACC
GGCAAGACGC TGCTCGCGAA GGCGGTGGCG GGCGAGGCGG GCGTGCCGTT CTTCTCGACG
AGCGGCTCGT CGTTCGTCGA GATGTTCGTC GGCGTCGGCG CGGCGCGCGT GCGCGATCTG
TTCGAGCAGG CGCAGCAAAA GGCGCCGTGC ATCATCTTCA TCGACGAGCT CGACGCGCTC
GGCAAGGTGC GCGGCGCGGG GCTCGCGTCG GGCAACGACG AGCGCGAGCA GACGCTGAAC
CAGTTGCTCG TGGAGATGGA CGGCTTCCAG GCGAACTCCG GCGTGATCCT CATGGCGGCG
ACCAATCGTC CGGAGATTCT CGATCCCGCG CTGCTGCGCC CGGGCCGCTT CGACCGCCAC
ATCGCGATCG ACCGGCCGGA CTTGACGGGG CGCCGGCAGA TCCTGTCGGT CCACGTGAAG
CACGTGAAGC TCGGCCCGGA CGTCGATCTC GGCGAGCTCG CGTCGCACAC GCCCGGCTTC
GTCGGCGCGG ATCTCGCGAA CATCGTCAAC GAGGCGGCGC TGCACGCGGC CGAGCTCGAC
AAGCCCGCGA TCGACATGTC CGATTTCGAC GAGGCGATCG ACCGCGCGAT GACCGGCATG
GAACGCAAGA GCCGCGTGAT GAGCGAGCGC GAGAAGATCA CGATCGCGCA TCACGAGGCG
GGGCACGCGC TGATCGCGCA GACGCGCGCG CACAGCGATC CGGTGAAGAA GGTGTCGATC
ATTCCGCGCG GCATCGCGGC GCTCGGCTAC ACGCAGCAGG TGCCGACCGA GGATCGCTAC
GTGCTGCGCA AGAGCGAGCT GCTCGACCGG CTCGACGTGC TGCTCGGCGG GCGCGTCGCC
GAGGAGATCG TGTTCGGCGA CGTGTCGACG GGCGCGGAGA ACGATCTCGA GCGCGCGACC
GAAATGGCGC GGCACATGGT CGCCCGCTAC GGGATGAGCG AGCGGATCGG CCTCGCGACG
TTCGGCGACG CGGACACCCA GGGGCTGTCG CCCCTCGTCT GGCAGCGCGG CGGCGAGCGC
TGCAGCGAGA GCACCGCGAC GCGGATCGAC GACGAGATCC AGCGGCTCCT CGCCGAGGCG
CACGATCGCG TGTCGCGTAC GCTGAAGGAG CGGCGCGGCG CGCTCGAACG GATCGCCGGG
TATCTGCTCG AGCACGAGGT GGTCGATCAC GACAAGCTCG TGAGGCTCGT CAACGACGAG
CCGACGCCCG AGCCCGGCGC GCGCGATCCG GGCGGCGACG CGGCGAAGCG AAGCGGCATC
GGCGCCGCGC CGGCGAAGCC GCCGGCGGAA GTCGGGAGCG CCGAGCTTCG CGATCCGGCT
CGAAAGGCCG ACAACGCGGA CCACTCCGTG CCGCAGTGA
 
Protein sequence
MIYGSNELYA AMRQRRDRLP RAHPADGYGA PARLKSGMGC TECGALYDDG RWSWHAAAGA 
LLQIVCPACR RIRERGRARA RRRLLRAPPR RHRRAAAPPR GRRHQRAPAR THSVDRRAAR
AHGRAHEGLA PRAPAHRGAR AHAPRRSRDR LSRRRGHAAR ALDARRRLAS AAVDSSASHN
ARPGIPMKSE TGYMGFVVVL VFMVLLALQL ATLSAPATQI AYSDFRKLAA AAQLDDLEVS
PTRITGVLRS ASAAAALPAS DAEAIKRAGT PWRFSTKRVT DERLIDTLAA TGTRYRGADD
DTWIGTLASW IVPIAVFALV WNLMLRRPRG GLQDWSGVGK SKPRVYVEAK TGIDFDDIAG
IDEAKAELQQ IVAFLRAPAR YQRLGGKIPK GVLIVGAPGT GKTLLAKAVA GEAGVPFFST
SGSSFVEMFV GVGAARVRDL FEQAQQKAPC IIFIDELDAL GKVRGAGLAS GNDEREQTLN
QLLVEMDGFQ ANSGVILMAA TNRPEILDPA LLRPGRFDRH IAIDRPDLTG RRQILSVHVK
HVKLGPDVDL GELASHTPGF VGADLANIVN EAALHAAELD KPAIDMSDFD EAIDRAMTGM
ERKSRVMSER EKITIAHHEA GHALIAQTRA HSDPVKKVSI IPRGIAALGY TQQVPTEDRY
VLRKSELLDR LDVLLGGRVA EEIVFGDVST GAENDLERAT EMARHMVARY GMSERIGLAT
FGDADTQGLS PLVWQRGGER CSESTATRID DEIQRLLAEA HDRVSRTLKE RRGALERIAG
YLLEHEVVDH DKLVRLVNDE PTPEPGARDP GGDAAKRSGI GAAPAKPPAE VGSAELRDPA
RKADNADHSV PQ