Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_1089 |
Symbol | |
ID | 4684645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | + |
Start bp | 1116549 |
End bp | 1118126 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639842259 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_989351 |
Protein GI | 121601825 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 0.831472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT CTACCCCTTC TTCTTCCGAT GTTGATGTCC AAGAACGCAT AGGAATGCGT AAAATCGTAG CTTTTATTGC TATGACTGTT GGCATGTTTA TGGCTATTTT GGATATCCAA ATTGTTTCCT CATCTTTAGC TGAAATTCAA GCTGGTCTTT CAGCAAGCTC TAATGAAATT TCATGGGTTC AAACCTCCTA TCTCATTGCA GAAGTCATTA TGTTACCCCT TTCTGGCTTT TTAGGGCGTT TACTTTCAAC ACGGGTTTTA TTCAGTGTAT CAGCCGCTGG ATTTACTATT GCCTCCATCC TTTGTGCAAC AGCAACATCT ATTGAACAGA TGATTGTTTA TCGAGCACTC CAAGGCTTTA TCGGTGGAGG CATTATTCCT TGTGTTTTTG TTGCTTCCTA TATCATGTTT CCTCCTTCGA AACGTCCAAT TATTTCACCG ATCATTGGAC TGGTTGCAAC ATTAGCACCC ACCATTGGTC CAACAGTGGG AGGATATGTC AGCCACGCCT TATCATGGCA TTGGCTCTTT CTTATCAATG TACCCTTTGG AATCATTATT TCAATTTTAG CTTGGAAATT GATTGATTTT GATAAAGCAG ATCCGTCTCT ATTGGCTAAA TTTGACTGGT GGGGACTTAT TTCTATGGCA CTCTTCCTGG GATCTTTAGA ATATGTTTTA GAAGAGGGAG CACATCGTGA TTGGTTCAAT GATAATTTAG TATTTAGCTT TTTTATTATT ATGGTTTTAT CTGCTAGTGT ATTCTTTTGG CGTGTTTTTA ATGTAAAAGA ACCAATTGTT GATCTTACTG CTTTTTCCAA TTTTAATTTT TCAATCTCTA CTATATTTGC CTTTATGCTT GGAATAGGCC TCTATGGCCT TACTTATTTA TATCCTGTCT ATTTAAGTCA AATTCGTCAT TATGATGCAC TCATGATTGG AAAAACGCTG TTTATTTCAG GTTTGGCTAT GTTTTTTACT GCTCCTCTTT CTGGATTTCT TTCAGCACGA ATCGATCCAC GTATTATGAT AGCTGTAGGA TTTGCTGGCT TTGCATGGGG AACTTGGCTT GCTACCTCAA TCACAGATGA TTGGGGATTC TGGGAACTTT TGTGGCCTCA AATTCTTCGC GGTAGTTCTA TGATGTTATG CATGGTTCCT ATCAATAACA TTGCTTTTGG ATCCTTATCA CCAGAACGGA TGAAAAATGC TTCTGGGATT TTTAATTTAA TGCGAAATCT TGGCGGTGCA GTAGGCCTTG CTATTATTAG CACTCTTATA ACACAACGGA CTAATCTCCA TTATGAACGC ATAGCTGAAG CCGTCCAACC TGGAAATATC CAAGCGACTG AAACACTTGC AAGCTTTACT AAACTTTTCA GCTTTTCTAC TTTTGATCCA CAAGCTCTTG CTTTAGTTCA ACTTTTTAAT ATGGTTTACA CACAAGCTGC AGTCATGGCT TTTAGTGATC TCTTTTTTAT GATATTTTTT CTCTTTAGTA TCTTAACTTT CTTAACTTTT TTTCTCAAAA AAATACCGCC ATCCACCAAT ATCCGCGCAG AGCACTGA
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Protein sequence | MKNSTPSSSD VDVQERIGMR KIVAFIAMTV GMFMAILDIQ IVSSSLAEIQ AGLSASSNEI SWVQTSYLIA EVIMLPLSGF LGRLLSTRVL FSVSAAGFTI ASILCATATS IEQMIVYRAL QGFIGGGIIP CVFVASYIMF PPSKRPIISP IIGLVATLAP TIGPTVGGYV SHALSWHWLF LINVPFGIII SILAWKLIDF DKADPSLLAK FDWWGLISMA LFLGSLEYVL EEGAHRDWFN DNLVFSFFII MVLSASVFFW RVFNVKEPIV DLTAFSNFNF SISTIFAFML GIGLYGLTYL YPVYLSQIRH YDALMIGKTL FISGLAMFFT APLSGFLSAR IDPRIMIAVG FAGFAWGTWL ATSITDDWGF WELLWPQILR GSSMMLCMVP INNIAFGSLS PERMKNASGI FNLMRNLGGA VGLAIISTLI TQRTNLHYER IAEAVQPGNI QATETLASFT KLFSFSTFDP QALALVQLFN MVYTQAAVMA FSDLFFMIFF LFSILTFLTF FLKKIPPSTN IRAEH
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