Gene BARBAKC583_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_0540 
SymbolispDF 
ID4684478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp550103 
End bp551296 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content40% 
IMG OID639841731 
ProductIspD/IspF bifunctional enzyme 
Protein accessionYP_988855 
Protein GI121602276 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.0129643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTTCTATTG CAGCGATCAT ATTAGCCGCC GGACGCGGAA GCAGAGCAGG ATCTCTCCAA 
AATGGTCCAA AACAATACCG ATTTTTAGGA CGAGAGCCGG TTATTTGTCA TACTATACGT
TGTTTTTTGC AACATCCAGC TATCACAAAT ATCATTTTAG TCATCCACCC AGATGACTAC
CAAATATGTG CAAATGCTAT AGCCGATCTT AAAGATCACC TCACAATTAT TGAAGGAGGT
GAGACACGCC AAATATCTAC TTTACAAGGA CTTCGTGCAC TCAAAAATGT TAAGCCAAAC
TATGTCCATA TTCATGATGG TGCACGCCCC TTTATCGGAA ATGAACTTCT TGAACAAATC
CATACCTCCA TCAACCACAA AGAAGGTATT CTCCCAGTTC TCTCTGTTTC TGATACCCTT
AAATATGTCA GCAACACACA TCACGTTTTA GAAACAATCC CACGCACTAA TCTCTATAGA
GCACAGACCC CTCAGTGCTT TCCATTTGAA CTTATCTTAG CTGCCCATGA AAAAGCGATG
CAATCTCATA AACAAGACTT TACTGATGAT TCAGCAATCG CTGAATGGTT TGGTATCCCT
ATACGCACCA TCCCTGGAGA TCCAAACAAT ATAAAAATTA CATGGCCAGC AGATCTTGAG
ACCGCACGCT CATACCTCCT CAAAGGCATG CAAATATTTC CTGATATTCG TACTGGAAAT
GGTTATGATG TTCATTCTTT TGAAGACGGC CATTATATCA CATTATGTGG TATCAAAATC
CCTTTTGAAA AGAAATTAAA CGGACATTCA GATGCTGATG TTGCGCTTCA TGCCCTAACG
GACGCTCTTC TCGCTACCCA AGGTGCAGGA GATATCGGCA CTCATTTTCC TCCTTCTGAT
CCGCAATGGA AAAATGCATC ATCAGAAATT TTCCTGCACC ACGCTATTGA AATTATTAAA
AAAGCAGAAG GTCGTATTGC CAATGTAGAT ATCACACTCA TTGCTGAAAA ACCCAAAATT
GGTCCCTATC GTCACATAAT GACAGAAAAT CTTATGAAGA TACTTAAAAT TTCAACTGAT
CGTATTTCCA TTAAAGCAAC AACCAACGAA AAATTGGGAT TTATTGGTCG TGAGGAAGGT
ATTGCTGCTC TTGCAACTGC TACTGTTATT TATCCAGGAG AAATTCCAAA ATAA
 
Protein sequence
MSIAAIILAA GRGSRAGSLQ NGPKQYRFLG REPVICHTIR CFLQHPAITN IILVIHPDDY 
QICANAIADL KDHLTIIEGG ETRQISTLQG LRALKNVKPN YVHIHDGARP FIGNELLEQI
HTSINHKEGI LPVLSVSDTL KYVSNTHHVL ETIPRTNLYR AQTPQCFPFE LILAAHEKAM
QSHKQDFTDD SAIAEWFGIP IRTIPGDPNN IKITWPADLE TARSYLLKGM QIFPDIRTGN
GYDVHSFEDG HYITLCGIKI PFEKKLNGHS DADVALHALT DALLATQGAG DIGTHFPPSD
PQWKNASSEI FLHHAIEIIK KAEGRIANVD ITLIAEKPKI GPYRHIMTEN LMKILKISTD
RISIKATTNE KLGFIGREEG IAALATATVI YPGEIPK