Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0540 |
Symbol | ispDF |
ID | 4684478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | - |
Start bp | 550103 |
End bp | 551296 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639841731 |
Product | IspD/IspF bifunctional enzyme |
Protein accession | YP_988855 |
Protein GI | 121602276 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.0129643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATTTCTATTG CAGCGATCAT ATTAGCCGCC GGACGCGGAA GCAGAGCAGG ATCTCTCCAA AATGGTCCAA AACAATACCG ATTTTTAGGA CGAGAGCCGG TTATTTGTCA TACTATACGT TGTTTTTTGC AACATCCAGC TATCACAAAT ATCATTTTAG TCATCCACCC AGATGACTAC CAAATATGTG CAAATGCTAT AGCCGATCTT AAAGATCACC TCACAATTAT TGAAGGAGGT GAGACACGCC AAATATCTAC TTTACAAGGA CTTCGTGCAC TCAAAAATGT TAAGCCAAAC TATGTCCATA TTCATGATGG TGCACGCCCC TTTATCGGAA ATGAACTTCT TGAACAAATC CATACCTCCA TCAACCACAA AGAAGGTATT CTCCCAGTTC TCTCTGTTTC TGATACCCTT AAATATGTCA GCAACACACA TCACGTTTTA GAAACAATCC CACGCACTAA TCTCTATAGA GCACAGACCC CTCAGTGCTT TCCATTTGAA CTTATCTTAG CTGCCCATGA AAAAGCGATG CAATCTCATA AACAAGACTT TACTGATGAT TCAGCAATCG CTGAATGGTT TGGTATCCCT ATACGCACCA TCCCTGGAGA TCCAAACAAT ATAAAAATTA CATGGCCAGC AGATCTTGAG ACCGCACGCT CATACCTCCT CAAAGGCATG CAAATATTTC CTGATATTCG TACTGGAAAT GGTTATGATG TTCATTCTTT TGAAGACGGC CATTATATCA CATTATGTGG TATCAAAATC CCTTTTGAAA AGAAATTAAA CGGACATTCA GATGCTGATG TTGCGCTTCA TGCCCTAACG GACGCTCTTC TCGCTACCCA AGGTGCAGGA GATATCGGCA CTCATTTTCC TCCTTCTGAT CCGCAATGGA AAAATGCATC ATCAGAAATT TTCCTGCACC ACGCTATTGA AATTATTAAA AAAGCAGAAG GTCGTATTGC CAATGTAGAT ATCACACTCA TTGCTGAAAA ACCCAAAATT GGTCCCTATC GTCACATAAT GACAGAAAAT CTTATGAAGA TACTTAAAAT TTCAACTGAT CGTATTTCCA TTAAAGCAAC AACCAACGAA AAATTGGGAT TTATTGGTCG TGAGGAAGGT ATTGCTGCTC TTGCAACTGC TACTGTTATT TATCCAGGAG AAATTCCAAA ATAA
|
Protein sequence | MSIAAIILAA GRGSRAGSLQ NGPKQYRFLG REPVICHTIR CFLQHPAITN IILVIHPDDY QICANAIADL KDHLTIIEGG ETRQISTLQG LRALKNVKPN YVHIHDGARP FIGNELLEQI HTSINHKEGI LPVLSVSDTL KYVSNTHHVL ETIPRTNLYR AQTPQCFPFE LILAAHEKAM QSHKQDFTDD SAIAEWFGIP IRTIPGDPNN IKITWPADLE TARSYLLKGM QIFPDIRTGN GYDVHSFEDG HYITLCGIKI PFEKKLNGHS DADVALHALT DALLATQGAG DIGTHFPPSD PQWKNASSEI FLHHAIEIIK KAEGRIANVD ITLIAEKPKI GPYRHIMTEN LMKILKISTD RISIKATTNE KLGFIGREEG IAALATATVI YPGEIPK
|
| |