Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0504 |
Symbol | pdxA |
ID | 4684858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | - |
Start bp | 507939 |
End bp | 508949 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639841695 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_988819 |
Protein GI | 121602284 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 0.869234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCCAT TAATTATTAG CGGCGGTGAT CCAGCTGGGA TAGGTCCCGA AATAGTTATC AAAGCTTGGA GTATGCGTAA TATACGTGAT ATTACGCCTT TTGTTCTTGT TGCTGATCCT GATGTTATTC GTTCACGCGC TCGTTTTTTT CAACTTAAGA TTGATGTAGA ATCTGTTTCT ATAGATAATC CTGTTAGAAA CTTCCAAACG GCTCTTCCTG TAATACCATT AAAAAACCAG CAAAGCGATC AACTAGGAGT GCCTTCACCA GACAATGCTG CTGGAACAAT TGAAGCCATC AAACACTGTG TTCAATTGAT TCACAGTGGC CATGCGCGCG CAATGGTCAC CTGTCCTATT GCAAAAAAAA ACCTTTATGA TATCGGATTT GAATTTGCAG GTCATACTGA ATTCTTAGCT CACCTTGCTC AAAAACATTT TGGTCAGCCC TATCATCCGA TTATGATGTT ATCTGGGCCT CAATTAAAAA CAGTGCCTAT TACTGTTCAT ATTCCACTTA ATGAAGTTCC CTTACACCTC ACCTCTGACC TAATCATTCG AACTTCTTTA AGTGTTGAAA GTGCTTTAAA GACGCAATTT GCGATAACTT CACCCCGTTT GGCTATCGCC GGTCTCAATC CCCACGCTGG AGAAAATGGC ACAATAGGGA AGGAGGATAT TGAAATTATC ACTCCTGCCA TTGACTATCT TAAGAAACAA GGTCTTCATA TCATAGGCCC TCTGTCTTCA GATACAATGT TCCATAAAAA TGCGAGACAA ACGTATGATG TTGCTCTTTG CATGTACCAT GATCAAGCCC TCATACCCAT TAAAACATTG GACTTTGACA CCACTGTTAA TATCACCTTA GGGTTACCTT TTATACGAAC ATCTCCGGAT CACGGGACTG CTTTTGATAT TGCTCATAAA GGCATTGCCT CTCCTGAAAG CTTTATTGCT GCTCTTCAAA CAGCAAACCA ACTCGCAAAC AATCATTTAA TATGCCAATA G
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Protein sequence | MAPLIISGGD PAGIGPEIVI KAWSMRNIRD ITPFVLVADP DVIRSRARFF QLKIDVESVS IDNPVRNFQT ALPVIPLKNQ QSDQLGVPSP DNAAGTIEAI KHCVQLIHSG HARAMVTCPI AKKNLYDIGF EFAGHTEFLA HLAQKHFGQP YHPIMMLSGP QLKTVPITVH IPLNEVPLHL TSDLIIRTSL SVESALKTQF AITSPRLAIA GLNPHAGENG TIGKEDIEII TPAIDYLKKQ GLHIIGPLSS DTMFHKNARQ TYDVALCMYH DQALIPIKTL DFDTTVNITL GLPFIRTSPD HGTAFDIAHK GIASPESFIA ALQTANQLAN NHLICQ
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