| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0489 |
|---|
| Symbol | radA |
|---|
| ID | 4684630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | - |
|---|
| Start bp | 494823 |
|---|
| End bp | 496196 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639841680 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_988804 |
|---|
| Protein GI | 121601948 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 0.665667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCA ATCGTATTAA ATTTATCTGC CAAAATTGTG GCACTATTTA TTCACGCTGG
GCTGGAAAAT GCACTTCTTG CGGAGAATGG AATTCTCTTA TTGAAGAAGA TATGAATAGC
GGCATTGGCA GTGGCCCTAT GAAAAATGTT CGTAAAGGGC GTGTCATAGC ACTCACTTCC
CTTTCTGGAG ATATTAAAGA TGCTCCACGC ATTCATTCTG GAATTGCTGA ACTTGATCGT
GTTACCGGTG GTGGTTTTGT TCGTGGATCT GCATTACTTG TCGGCGGCGA TCCAGGTATT
GGCAAATCAA CACTGCTTAC ACAAACAGCA GCTGCATTAT CGCAAAAAGG ACATCACGTT
ATTTATGTTT CAGGTGAAGA AGCTGTTGAA CAAATCCGCT TACGCGCACA AAGGCTTGGT
GCTGCAGATA CAGCAGTCCA ACTTGCTGCA GAAACTAATG TTGAGGATAT TCTTGCAACC
TTAAATGAGC ATAAAAAACT TGATATGGTC ATTATTGATT CAATTCAAAC CCTATGGTCA
GATGCGACTG AATCAGCTCC TGGAACTGTA ACGCAAGTGC GCATCAGTGC TCAAGAAATA
ATTCGTTTTG CAAAAAAAAC AGGCGCTGCC GTTATTCTCG TTGGTCACGT TACTAAAGAT
GGACAAATCG CAGGCCCCCG CGTTGTAGAA CACATGGTGG ATGGTGTTCT CTATTTTGAG
GGTGAAGGCA GCCATCATTA TCGAATCTTA AGAACCGTAA AAAATCGTTT CGGGCCAACT
AATGAAATTG GCGTTTTTGA AATGTCCGAT AAAGGATTAC AGGAAGTTAC CAATCCATCT
GAACTTTTTT TAGGGGAACG GAATGAAAAA GCACCAGGAG CTGCTGTTTT TGCAGGAATG
GAAGGAACAC GCCCTATATT AGTAGAAATT CAAGCACTTG TTGCTCCCTC TTCTCTTGGA
ACACCACGAC GCACTGTTGT AGGATGGGAT GGAGGTCGTC TTTCGATGAT TTTAGCTGTT
TTAGAATCTC ATTGTGGTGT TCGCTTTGGG CAACATGATG TCTATCTTAA TGTTGCAGGT
GGCTACAAAA TATCAGAACC CGCAGCTGAT TTAGCTGTTG CGGCTGCTTT GGTGTCCTCT
CTTGCAAACA TTCCTCTCCC TGCTCATTAT GTATATTTTG GTGAAATCAG TCTTTCAGGA
ACAATTCGCA CTGTTTCTCA TTCAGTACAA CGCATCAAAG AAGCAGAAAA ACTTGGCTTT
CAAGGTTCTA TTCAACCTTC CGCAACAATT GAAATGAAAT CACCAATCTT TCAACAAAGA
ACATTTTCTG ACCTTTCTGA ATTAGTTGCC ATTATTGTTG CCAATAAAAA ATAA
|
|---|
| Protein sequence | MARNRIKFIC QNCGTIYSRW AGKCTSCGEW NSLIEEDMNS GIGSGPMKNV RKGRVIALTS
LSGDIKDAPR IHSGIAELDR VTGGGFVRGS ALLVGGDPGI GKSTLLTQTA AALSQKGHHV
IYVSGEEAVE QIRLRAQRLG AADTAVQLAA ETNVEDILAT LNEHKKLDMV IIDSIQTLWS
DATESAPGTV TQVRISAQEI IRFAKKTGAA VILVGHVTKD GQIAGPRVVE HMVDGVLYFE
GEGSHHYRIL RTVKNRFGPT NEIGVFEMSD KGLQEVTNPS ELFLGERNEK APGAAVFAGM
EGTRPILVEI QALVAPSSLG TPRRTVVGWD GGRLSMILAV LESHCGVRFG QHDVYLNVAG
GYKISEPAAD LAVAAALVSS LANIPLPAHY VYFGEISLSG TIRTVSHSVQ RIKEAEKLGF
QGSIQPSATI EMKSPIFQQR TFSDLSELVA IIVANKK
|
|---|
| |